RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CDK7P50613 346 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 PSMC6P62333 389 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 PPP2R5BQ15173 497 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 OR6J1Q8NGC5 347 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 NSUN6Q8TEA1 469 aaKnown RBP20.24■□□□□ 0.83
MRPL28-208ENST00000469744 TOX2Q96NM4 488 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 Q9Y3F1 56 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 KIAA0355O15063 1070 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 LARGE1O95461 756 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 RAG1P15918 1043 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 TOB2Q14106 344 aaPredicted RBP20.24■□□□□ 0.83
MRPL28-208ENST00000469744 ARHGEF16Q5VV41 709 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 CCDC83Q8IWF9 413 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 SCFD2Q8WU76 684 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 B4DLN1 442 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 STX6O43752 255 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 ZEB2O60315 1214 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 DDAH1O94760 285 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 ZSCAN22P10073 491 aaPredicted RBP20.23■□□□□ 0.83
MRPL28-208ENST00000469744 TXNP10599 105 aaKnown RBP20.23■□□□□ 0.83
MRPL28-208ENST00000469744 HSD17B4P51659 736 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 MRPL12P52815 198 aaKnown RBP20.23■□□□□ 0.83
MRPL28-208ENST00000469744 LRIT3Q3SXY7 679 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 C9orf50Q5SZB4 431 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 SEPT14Q6ZU15 432 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 FAM126BQ8IXS8 530 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 CTCFLQ8NI51 663 aaPredicted RBP20.23■□□□□ 0.83
MRPL28-208ENST00000469744 TMEM87BQ96K49 555 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 PXMP2Q9NR77 195 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 ATP6V1DQ9Y5K8 247 aa20.23■□□□□ 0.83
MRPL28-208ENST00000469744 GRIN2DO15399 1336 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 MROH7Q68CQ1 1323 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 PNMA6FA0A0J9YX94 578 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 CCDC69A6NI79 296 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 PLEKHA8P1O95397 391 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 MBD3O95983 291 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 ST3GAL1Q11201 340 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 ITGA7Q13683 1181 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 SHHQ15465 462 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 DHX32Q7L7V1 743 aaKnown RBP20.22■□□□□ 0.83
MRPL28-208ENST00000469744 CMTR1Q8N1G2 835 aaKnown RBP20.22■□□□□ 0.83
MRPL28-208ENST00000469744 FBXL16Q8N461 479 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 TCEANC2Q96MN5 208 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 GZF1Q9H116 711 aaPredicted RBP20.22■□□□□ 0.83
MRPL28-208ENST00000469744 TBX21Q9UL17 535 aa20.22■□□□□ 0.83
MRPL28-208ENST00000469744 CABYRO75952 493 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 MYL3P08590 195 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 PDCP20941 246 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 SYT1P21579 422 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 GJB2P29033 226 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 EPHB4P54760 987 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 PPP1R13LQ8WUF5 828 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 MTA3Q9BTC8 594 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 AGXT2Q9BYV1 514 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 MAF1Q9H063 256 aa20.21■□□□□ 0.83
MRPL28-208ENST00000469744 PRPF40AO75400 957 aaKnown RBP20.2■□□□□ 0.82
MRPL28-208ENST00000469744 KIF5BP33176 963 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 MRE11P49959 708 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 CPT1AP50416 773 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 TTLL4Q14679 1199 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 STXBP2Q15833 593 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 LY6KQ17RY6 165 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 FCHSD1Q86WN1 690 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 IL31RAQ8NI17 732 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 IWS1Q96ST2 819 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 MAP3K14Q99558 947 aa20.2■□□□□ 0.82
MRPL28-208ENST00000469744 NKRFO15226 690 aaKnown RBP eCLIP20.19■□□□□ 0.82
MRPL28-208ENST00000469744 NR3C2P08235 984 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 MYCLP12524 364 aaPredicted RBP20.19■□□□□ 0.82
MRPL28-208ENST00000469744 LIFRP42702 1097 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 PURAQ00577 322 aaKnown RBP20.19■□□□□ 0.82
MRPL28-208ENST00000469744 EXOSC10Q01780 885 aaKnown RBP20.19■□□□□ 0.82
MRPL28-208ENST00000469744 GHRHRQ02643 423 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 CCDC62Q6P9F0 684 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 TMTC2Q8N394 836 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 SRBD1Q8N5C6 995 aaKnown RBP20.19■□□□□ 0.82
MRPL28-208ENST00000469744 SLC43A3Q8NBI5 491 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 ZFP91Q96JP5 570 aaPredicted RBP20.19■□□□□ 0.82
MRPL28-208ENST00000469744 LARP6Q9BRS8 491 aaKnown RBP20.19■□□□□ 0.82
MRPL28-208ENST00000469744 SPZ1Q9BXG8 430 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 PPP1R12CQ9BZL4 782 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 TRPV6Q9H1D0 765 aa20.19■□□□□ 0.82
MRPL28-208ENST00000469744 GCOM1H8Y6P7 765 aaPredicted RBP20.18■□□□□ 0.82
MRPL28-208ENST00000469744 TLR3O15455 904 aaKnown RBP20.18■□□□□ 0.82
MRPL28-208ENST00000469744 TIMP1P01033 207 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 CD4P01730 458 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 POLR2MP0CAP2 368 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 Q7L0L9 218 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 MICU3Q86XE3 530 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 RRP36Q96EU6 259 aaKnown RBP20.18■□□□□ 0.82
MRPL28-208ENST00000469744 PDCD2LQ9BRP1 358 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 POLR3EQ9NVU0 708 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 SLC12A7Q9Y666 1083 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 TCHHQ07283 1943 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 SCN10AQ9Y5Y9 1956 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 MYH7BA7E2Y1 1941 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 hCG_1642624A0A1W2PR95 340 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 F13A1P00488 732 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 ZNF445P59923 1031 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms