RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 CCDC47Q96A33 483 aaKnown RBP13.4□□□□□ -0.26
VARS2-205ENST00000469358 NFU1Q9UMS0 254 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 PHLPP1O60346 1717 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 KDM4FA0A1W2PPD8 638 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 CORO7P57737 925 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 UBE2SQ16763 222 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 FAM182BQ5T319 152 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 SV2BQ7L1I2 683 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 BCAS4Q8TDM0 211 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
VARS2-205ENST00000469358 BAP1Q92560 729 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 CEP95Q96GE4 821 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 EYA3Q99504 573 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 PACSIN1Q9BY11 444 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 NPHP3-ACAD11A0A0J9YXS1 232 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 MAGEA9P43362 315 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 KCNMA1Q12791 1236 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 CNNM4Q6P4Q7 775 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 FAM114A1Q8IWE2 563 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 LRRC47Q8N1G4 583 aaKnown RBP13.39□□□□□ -0.27
VARS2-205ENST00000469358 CALML4Q96GE6 196 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 TLR2O60603 784 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 MCM3P25205 808 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 KLHDC7AQ5VTJ3 777 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 MICALL1Q8N3F8 863 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 DDX12PQ92771 950 aa13.39□□□□□ -0.27
VARS2-205ENST00000469358 ZEB2O60315 1214 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 PRPHP41219 470 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 CDK8P49336 464 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 CALCRLQ16602 461 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 TTC31Q49AM3 519 aaPredicted RBP13.38□□□□□ -0.27
VARS2-205ENST00000469358 MMGT1Q8N4V1 131 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 DAGLBQ8NCG7 672 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 RPGRIP1Q96KN7 1286 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 CAPS2Q9BXY5 557 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 TNNI2P48788 182 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 GNAQP50148 359 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 C8orf74Q6P047 294 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 ZNF662Q6ZS27 426 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
VARS2-205ENST00000469358 FNBP4Q8N3X1 1017 aaPredicted RBP13.38□□□□□ -0.27
VARS2-205ENST00000469358 SNX29Q8TEQ0 813 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
VARS2-205ENST00000469358 ZIM3Q96PE6 472 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.38□□□□□ -0.27
VARS2-205ENST00000469358 C6orf50Q9HD87 102 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 STIM2Q9P246 746 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 HYOU1Q9Y4L1 999 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 GRIN2DO15399 1336 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 PALMO75781 387 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
VARS2-205ENST00000469358 GUCY2DQ02846 1103 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 LRRC55Q6ZSA7 311 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 KRT25Q7Z3Z0 450 aa13.38□□□□□ -0.27
VARS2-205ENST00000469358 MYL1P05976 194 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 MAN2A1Q16706 1144 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 HGSNATQ68CP4 663 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 SETDB2Q96T68 719 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 EPB41L5Q9HCM4 733 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 SEC63Q9UGP8 760 aaKnown RBP13.37□□□□□ -0.27
VARS2-205ENST00000469358 DLEC1Q9Y238 1755 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 A0A1W2PQJ5 194 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 TRAF5O00463 557 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 EHHADHQ08426 723 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 CCDC70Q6NSX1 233 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 AK8Q96MA6 479 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 CCDC43Q96MW1 224 aaKnown RBP13.37□□□□□ -0.27
VARS2-205ENST00000469358 TSGA10Q9BZW7 698 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 ZHX3Q9H4I2 956 aa13.37□□□□□ -0.27
VARS2-205ENST00000469358 LAD1O00515 517 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 KLRC1P26715 233 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 BTDP43251 543 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 AMPD3Q01432 767 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 PDXDC1Q6P996 788 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 TBC1D5Q92609 795 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 KAT2BQ92831 832 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 ALS2CR12Q96Q35 445 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 KRT12Q99456 494 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 KLHL7Q8IXQ5 586 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 AMOTL1Q8IY63 956 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 ANKS1AQ92625 1134 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 LSM14BQ9BX40 385 aaKnown RBP13.36□□□□□ -0.27
VARS2-205ENST00000469358 ADAMTS1Q9UHI8 967 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 NOL4O94818 638 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 TM4SF1P30408 202 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 HNRNPH3P31942 346 aaKnown RBP13.36□□□□□ -0.27
VARS2-205ENST00000469358 SLC16A2P36021 539 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 CDK17Q00537 523 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 GUCY1A3Q02108 690 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 CCDC40Q4G0X9 1142 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 FIGNQ5HY92 759 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 IQCEQ6IPM2 695 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 UNC13DQ70J99 1090 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 MTMR9Q96QG7 549 aa13.36□□□□□ -0.27
VARS2-205ENST00000469358 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms