RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SYTL5Q8TDW5 730 aaPredicted RBP23.2■■□□□ 1.3
TMEM53-207ENST00000468117 ZNF526Q8TF50 670 aaPredicted RBP23.2■■□□□ 1.3
TMEM53-207ENST00000468117 SMARCE1Q969G3 411 aa23.2■■□□□ 1.3
TMEM53-207ENST00000468117 ZFP91Q96JP5 570 aaPredicted RBP23.2■■□□□ 1.3
TMEM53-207ENST00000468117 A0A0G2JMZ2 1700 aa23.19■■□□□ 1.3
TMEM53-207ENST00000468117 IGLV3-22A0A075B6J6 115 aa23.19■■□□□ 1.3
TMEM53-207ENST00000468117 ATP2A1O14983 1001 aa23.19■■□□□ 1.3
TMEM53-207ENST00000468117 NT5DC1Q5TFE4 455 aa23.19■■□□□ 1.3
TMEM53-207ENST00000468117 SLC30A10Q6XR72 485 aa23.19■■□□□ 1.3
TMEM53-207ENST00000468117 SLFN12Q8IYM2 578 aa23.19■■□□□ 1.3
TMEM53-207ENST00000468117 ANP32BQ92688 251 aaKnown RBP23.19■■□□□ 1.3
TMEM53-207ENST00000468117 TEX13BQ9BXU2 312 aa23.19■■□□□ 1.3
TMEM53-207ENST00000468117 MSH4O15457 936 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 HOXA7P31268 230 aaPredicted RBP23.18■■□□□ 1.3
TMEM53-207ENST00000468117 GJA5P36382 358 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 SARSP49591 514 aaKnown RBP23.18■■□□□ 1.3
TMEM53-207ENST00000468117 POTEEQ6S8J3 1075 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 RNF207Q6ZRF8 634 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 SPATA20Q8TB22 786 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 SLC10A4Q96EP9 437 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 MAP3K20Q9NYL2 800 aaKnown RBP23.18■■□□□ 1.3
TMEM53-207ENST00000468117 TBX3O15119 743 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 PEX10O60683 326 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 DPYDQ12882 1025 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 NUDT12Q9BQG2 462 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 BLZF1Q9H2G9 400 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 MAN1B1Q9UKM7 699 aa23.18■■□□□ 1.3
TMEM53-207ENST00000468117 BMP6P22004 513 aa23.17■■□□□ 1.3
TMEM53-207ENST00000468117 STAT3P40763 770 aa23.17■■□□□ 1.3
TMEM53-207ENST00000468117 IQCB1Q15051 598 aa23.17■■□□□ 1.3
TMEM53-207ENST00000468117 SNX29Q8TEQ0 813 aa23.17■■□□□ 1.3
TMEM53-207ENST00000468117 CALML4Q96GE6 196 aa23.17■■□□□ 1.3
TMEM53-207ENST00000468117 RPTORQ8N122 1335 aa23.17■■□□□ 1.3
TMEM53-207ENST00000468117 SMC2O95347 1197 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 MOGSQ13724 837 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 CEP55Q53EZ4 464 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 KRT79Q5XKE5 535 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 SAMD3Q8N6K7 520 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 IL31RAQ8NI17 732 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 PURBQ96QR8 312 aaKnown RBP23.16■■□□□ 1.3
TMEM53-207ENST00000468117 TAAR1Q96RJ0 339 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 NAT10Q9H0A0 1025 aaKnown RBP23.16■■□□□ 1.3
TMEM53-207ENST00000468117 IRX3P78415 501 aaPredicted RBP23.16■■□□□ 1.3
TMEM53-207ENST00000468117 GRB10Q13322 594 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 CUL4BQ13620 913 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 BAATQ14032 418 aaPredicted RBP23.16■■□□□ 1.3
TMEM53-207ENST00000468117 LBX2Q6XYB7 198 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 FAM20AQ96MK3 541 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 AGTPBP1Q9UPW5 1226 aa23.16■■□□□ 1.3
TMEM53-207ENST00000468117 PLA2G4DQ86XP0 818 aa23.15■■□□□ 1.3
TMEM53-207ENST00000468117 PNMA5Q96PV4 448 aa23.15■■□□□ 1.3
TMEM53-207ENST00000468117 ASCC2Q9H1I8 757 aaPredicted RBP23.15■■□□□ 1.3
TMEM53-207ENST00000468117 SPIRE1Q08AE8 756 aa23.15■■□□□ 1.3
TMEM53-207ENST00000468117 CDK5RAP3Q96JB5 506 aa23.15■■□□□ 1.3
TMEM53-207ENST00000468117 GBA2Q9HCG7 927 aaPredicted RBP23.15■■□□□ 1.3
TMEM53-207ENST00000468117 KBTBD4Q9NVX7 518 aa23.15■■□□□ 1.3
TMEM53-207ENST00000468117 BTBD7Q9P203 1132 aa23.15■■□□□ 1.3
TMEM53-207ENST00000468117 RABGAP1Q9Y3P9 1069 aa23.15■■□□□ 1.3
TMEM53-207ENST00000468117 GTPBP6O43824 516 aaPredicted RBP23.14■■□□□ 1.29
TMEM53-207ENST00000468117 CELF2O95319 508 aaKnown RBP23.14■■□□□ 1.29
TMEM53-207ENST00000468117 EIF2AK2P19525 551 aaKnown RBP23.14■■□□□ 1.29
TMEM53-207ENST00000468117 MORC3Q14149 939 aa23.14■■□□□ 1.29
TMEM53-207ENST00000468117 DHX40Q8IX18 779 aaKnown RBP23.14■■□□□ 1.29
TMEM53-207ENST00000468117 RMDN3Q96TC7 470 aa23.14■■□□□ 1.29
TMEM53-207ENST00000468117 CUEDC2Q9H467 287 aa23.14■■□□□ 1.29
TMEM53-207ENST00000468117 ACAD9Q9H845 621 aa23.14■■□□□ 1.29
TMEM53-207ENST00000468117 MEIS1O00470 390 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 PLCB2Q00722 1185 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 ECM1Q16610 540 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 FASTKD5Q7L8L6 764 aaKnown RBP23.13■■□□□ 1.29
TMEM53-207ENST00000468117 AOPEPQ8N6M6 819 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 LCTP09848 1927 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 DCAF8L1A6NGE4 600 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 UNCXA6NJT0 531 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 HERVK_113P62684 666 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 SNAPC2Q13487 334 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 TKFCQ3LXA3 575 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 MB21D1Q8N884 522 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 TRIML1Q8N9V2 468 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 GSDMAQ96QA5 445 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 FRMPD4Q14CM0 1322 aa23.13■■□□□ 1.29
TMEM53-207ENST00000468117 BECN2A8MW95 431 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 ARP10275 920 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 ITGB5P18084 799 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 FKBP1BP68106 108 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 PGM5Q15124 567 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 PCNX4Q63HM2 1172 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 NCAPH2Q6IBW4 605 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 MXRA8Q9BRK3 442 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 A1CFQ9NQ94 594 aaKnown RBP23.12■■□□□ 1.29
TMEM53-207ENST00000468117 PXMP2Q9NR77 195 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 VAV3Q9UKW4 847 aa23.12■■□□□ 1.29
TMEM53-207ENST00000468117 AP5Z1O43299 807 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 CCT6AP40227 531 aaKnown RBP23.11■■□□□ 1.29
TMEM53-207ENST00000468117 MRPS9P82933 396 aaKnown RBP23.11■■□□□ 1.29
TMEM53-207ENST00000468117 SETQ01105 290 aaPredicted RBP23.11■■□□□ 1.29
TMEM53-207ENST00000468117 GPAT2Q6NUI2 795 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 BPIFA3Q9BQP9 254 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 PAGR1Q9BTK6 254 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 MAGEF1Q9HAY2 307 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms