RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TOP1MTQ969P6 601 aa14.06□□□□□ -0.16
VPS26A-204ENST00000467852 SLC38A10Q9HBR0 1119 aa14.06□□□□□ -0.16
VPS26A-204ENST00000467852 SORCS3Q9UPU3 1222 aa14.06□□□□□ -0.16
VPS26A-204ENST00000467852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.06□□□□□ -0.16
VPS26A-204ENST00000467852 ATXN1P54253 815 aaKnown RBP14.05□□□□□ -0.16
VPS26A-204ENST00000467852 GDF6Q6KF10 455 aaPredicted RBP14.05□□□□□ -0.16
VPS26A-204ENST00000467852 KIFC2Q96AC6 838 aa14.05□□□□□ -0.16
VPS26A-204ENST00000467852 NUP88Q99567 741 aaPredicted RBP14.05□□□□□ -0.16
VPS26A-204ENST00000467852 A1CFQ9NQ94 594 aaKnown RBP14.05□□□□□ -0.16
VPS26A-204ENST00000467852 PIH1D3Q9NQM4 214 aaKnown RBP14.05□□□□□ -0.16
VPS26A-204ENST00000467852 DDX49Q9Y6V7 483 aaKnown RBP14.05□□□□□ -0.16
VPS26A-204ENST00000467852 EMSYQ7Z589 1322 aa14.05□□□□□ -0.16
VPS26A-204ENST00000467852 MMP1P03956 469 aa14.04□□□□□ -0.16
VPS26A-204ENST00000467852 ADRB1P08588 477 aa14.04□□□□□ -0.16
VPS26A-204ENST00000467852 ZAP70P43403 619 aa14.04□□□□□ -0.16
VPS26A-204ENST00000467852 DMWDQ09019 674 aa14.04□□□□□ -0.16
VPS26A-204ENST00000467852 CCDC105Q8IYK2 499 aa14.04□□□□□ -0.16
VPS26A-204ENST00000467852 DBF4BQ8NFT6 615 aa14.04□□□□□ -0.16
VPS26A-204ENST00000467852 DHX38Q92620 1227 aaKnown RBP14.04□□□□□ -0.16
VPS26A-204ENST00000467852 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
VPS26A-204ENST00000467852 BARX2Q9UMQ3 279 aaPredicted RBP14.04□□□□□ -0.16
VPS26A-204ENST00000467852 A6NJR5 290 aa14.03□□□□□ -0.16
VPS26A-204ENST00000467852 TMED8Q6PL24 325 aaPredicted RBP14.03□□□□□ -0.16
VPS26A-204ENST00000467852 SESTD1Q86VW0 696 aa14.03□□□□□ -0.16
VPS26A-204ENST00000467852 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
VPS26A-204ENST00000467852 FLCNQ8NFG4 579 aa14.03□□□□□ -0.16
VPS26A-204ENST00000467852 SUSD6Q92537 303 aa14.03□□□□□ -0.16
VPS26A-204ENST00000467852 IL17RAQ96F46 866 aa14.03□□□□□ -0.16
VPS26A-204ENST00000467852 CTAGE1Q96RT6 745 aa14.03□□□□□ -0.16
VPS26A-204ENST00000467852 CRNKL1Q9BZJ0 848 aaKnown RBP14.03□□□□□ -0.16
VPS26A-204ENST00000467852 NKRFO15226 690 aaKnown RBP eCLIP14.02□□□□□ -0.17
VPS26A-204ENST00000467852 BRD1O95696 1058 aa14.02□□□□□ -0.17
VPS26A-204ENST00000467852 ZNF618Q5T7W0 954 aa14.02□□□□□ -0.17
VPS26A-204ENST00000467852 ZC3H14Q6PJT7 736 aaKnown RBP14.02□□□□□ -0.17
VPS26A-204ENST00000467852 MRPL50Q8N5N7 158 aaKnown RBP14.02□□□□□ -0.17
VPS26A-204ENST00000467852 DTWD2Q8NBA8 298 aa14.02□□□□□ -0.17
VPS26A-204ENST00000467852 IFIH1Q9BYX4 1025 aaKnown RBP14.02□□□□□ -0.17
VPS26A-204ENST00000467852 RNF146Q9NTX7 359 aa14.02□□□□□ -0.17
VPS26A-204ENST00000467852 NR2E1Q9Y466 385 aa14.02□□□□□ -0.17
VPS26A-204ENST00000467852 MAGEB6P1A0A0J9YX57 407 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 SRGAP3O43295 1099 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 CHRM1P11229 460 aaPredicted RBP14.01□□□□□ -0.17
VPS26A-204ENST00000467852 NRIP1P48552 1158 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 PTK7Q13308 1070 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 COL9A3Q14050 684 aaPredicted RBP14.01□□□□□ -0.17
VPS26A-204ENST00000467852 MBTPS1Q14703 1052 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 MORC4Q8TE76 937 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 RTP3Q9BQQ7 232 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 RIOK1Q9BRS2 568 aaKnown RBP14.01□□□□□ -0.17
VPS26A-204ENST00000467852 PLVAPQ9BX97 442 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 FEM1BQ9UK73 627 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 R4GN57 208 aa14.01□□□□□ -0.17
VPS26A-204ENST00000467852 RBM47A0AV96 593 aaKnown RBP14□□□□□ -0.17
VPS26A-204ENST00000467852 F5H6K3 240 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 RIOK3O14730 519 aaKnown RBP14□□□□□ -0.17
VPS26A-204ENST00000467852 FDX1P10109 184 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 CYP2D6P10635 497 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 AOC1P19801 751 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 SP100P23497 879 aaPredicted RBP14□□□□□ -0.17
VPS26A-204ENST00000467852 CDK8P49336 464 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 KLRC3Q07444 240 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 G3BP1Q13283 466 aaKnown RBP eCLIP14□□□□□ -0.17
VPS26A-204ENST00000467852 PPP2R5BQ15173 497 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 TKFCQ3LXA3 575 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 ADGRD2Q7Z7M1 963 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 RBM23Q86U06 439 aaKnown RBP14□□□□□ -0.17
VPS26A-204ENST00000467852 GPR161Q8N6U8 529 aaKnown RBP14□□□□□ -0.17
VPS26A-204ENST00000467852 ZNF512BQ96KM6 892 aaPredicted RBP14□□□□□ -0.17
VPS26A-204ENST00000467852 RTKNQ9BST9 563 aa14□□□□□ -0.17
VPS26A-204ENST00000467852 CDV3Q9UKY7 258 aaKnown RBP14□□□□□ -0.17
VPS26A-204ENST00000467852 GLP2RO95838 553 aa13.99□□□□□ -0.17
VPS26A-204ENST00000467852 PLEKHG4Q58EX7 1191 aa13.99□□□□□ -0.17
VPS26A-204ENST00000467852 TRAF7Q6Q0C0 670 aa13.99□□□□□ -0.17
VPS26A-204ENST00000467852 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
VPS26A-204ENST00000467852 SEPT8Q92599 483 aa13.99□□□□□ -0.17
VPS26A-204ENST00000467852 TRERF1Q96PN7 1200 aa13.99□□□□□ -0.17
VPS26A-204ENST00000467852 PHF12Q96QT6 1004 aa13.99□□□□□ -0.17
VPS26A-204ENST00000467852 DCP1AQ9NPI6 582 aaPredicted RBP13.99□□□□□ -0.17
VPS26A-204ENST00000467852 ADD3Q9UEY8 706 aaKnown RBP13.99□□□□□ -0.17
VPS26A-204ENST00000467852 GTF2IRD1Q9UHL9 959 aa13.99□□□□□ -0.17
VPS26A-204ENST00000467852 PLAGL2Q9UPG8 496 aa13.99□□□□□ -0.17
VPS26A-204ENST00000467852 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
VPS26A-204ENST00000467852 DCDC2BA2VCK2 349 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 PRR5-ARHGAP8B1AHC4 643 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 RSPH10B2B2RC85 870 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 PI15O43692 258 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 NDUFB10O96000 172 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 RSPH10BP0C881 870 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 ARHGAP8P85298 464 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 CAMK1Q14012 370 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 CWF19L1Q69YN2 538 aaKnown RBP13.98□□□□□ -0.17
VPS26A-204ENST00000467852 C7orf31Q8N865 590 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 CLP1Q92989 425 aaKnown RBP13.98□□□□□ -0.17
VPS26A-204ENST00000467852 NEK1Q96PY6 1258 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 TLE6Q9H808 572 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 CYP39A1Q9NYL5 469 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 FANCMQ8IYD8 2048 aa13.98□□□□□ -0.17
VPS26A-204ENST00000467852 FSD2A1L4K1 749 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 SOBPA7XYQ1 873 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms