RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 KMT2EQ8IZD2 1858 aa11.34□□□□□ -0.59
APP-213ENST00000464867 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.33□□□□□ -0.6
APP-213ENST00000464867 PROB1E7EW31 1015 aa11.33□□□□□ -0.6
APP-213ENST00000464867 IDH1O75874 414 aaKnown RBP11.33□□□□□ -0.6
APP-213ENST00000464867 GJB5O95377 273 aa11.33□□□□□ -0.6
APP-213ENST00000464867 MS4A1P11836 297 aa11.33□□□□□ -0.6
APP-213ENST00000464867 GABPAQ06546 454 aa11.33□□□□□ -0.6
APP-213ENST00000464867 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
APP-213ENST00000464867 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
APP-213ENST00000464867 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
APP-213ENST00000464867 CCDC155Q8N6L0 562 aa11.33□□□□□ -0.6
APP-213ENST00000464867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.33□□□□□ -0.6
APP-213ENST00000464867 SLF1Q9BQI6 1058 aa11.33□□□□□ -0.6
APP-213ENST00000464867 MCM9Q9NXL9 1143 aa11.33□□□□□ -0.6
APP-213ENST00000464867 TRIP12Q14669 1992 aaPredicted RBP11.33□□□□□ -0.6
APP-213ENST00000464867 TANC1Q9C0D5 1861 aa11.33□□□□□ -0.6
APP-213ENST00000464867 PTPRSQ13332 1948 aa11.33□□□□□ -0.6
APP-213ENST00000464867 ASTN1O14525 1302 aa11.33□□□□□ -0.6
APP-213ENST00000464867 ASB14A6NK59 587 aa11.32□□□□□ -0.6
APP-213ENST00000464867 H0Y858 1186 aa11.32□□□□□ -0.6
APP-213ENST00000464867 STXBP3O00186 592 aa11.32□□□□□ -0.6
APP-213ENST00000464867 EFCAB14O75071 495 aa11.32□□□□□ -0.6
APP-213ENST00000464867 ZBED4O75132 1171 aa11.32□□□□□ -0.6
APP-213ENST00000464867 KRT37O76014 449 aa11.32□□□□□ -0.6
APP-213ENST00000464867 SKOR1P84550 965 aa11.32□□□□□ -0.6
APP-213ENST00000464867 G3BP1Q13283 466 aaKnown RBP eCLIP11.32□□□□□ -0.6
APP-213ENST00000464867 SMAD2Q15796 467 aaKnown RBP11.32□□□□□ -0.6
APP-213ENST00000464867 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
APP-213ENST00000464867 FAM83BQ5T0W9 1011 aa11.32□□□□□ -0.6
APP-213ENST00000464867 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
APP-213ENST00000464867 TMCO2Q7Z6W1 182 aaPredicted RBP11.32□□□□□ -0.6
APP-213ENST00000464867 REPS2Q8NFH8 660 aa11.32□□□□□ -0.6
APP-213ENST00000464867 MRGPRX2Q96LB1 330 aa11.32□□□□□ -0.6
APP-213ENST00000464867 FSD1Q9BTV5 496 aa11.32□□□□□ -0.6
APP-213ENST00000464867 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
APP-213ENST00000464867 TLR9Q9NR96 1032 aa11.32□□□□□ -0.6
APP-213ENST00000464867 RIPK3Q9Y572 518 aa11.32□□□□□ -0.6
APP-213ENST00000464867 USP17L12C9JPN9 530 aa11.31□□□□□ -0.6
APP-213ENST00000464867 USP17L21D6R901 530 aa11.31□□□□□ -0.6
APP-213ENST00000464867 SMPD1P17405 629 aa11.31□□□□□ -0.6
APP-213ENST00000464867 ZXDAP98168 799 aa11.31□□□□□ -0.6
APP-213ENST00000464867 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
APP-213ENST00000464867 ASCL5Q7RTU5 278 aa11.31□□□□□ -0.6
APP-213ENST00000464867 SIAH1Q8IUQ4 282 aa11.31□□□□□ -0.6
APP-213ENST00000464867 PRPF38AQ8NAV1 312 aaKnown RBP11.31□□□□□ -0.6
APP-213ENST00000464867 CHST13Q8NET6 341 aa11.31□□□□□ -0.6
APP-213ENST00000464867 CCDC17Q96LX7 622 aa11.31□□□□□ -0.6
APP-213ENST00000464867 SAMD11Q96NU1 681 aa11.31□□□□□ -0.6
APP-213ENST00000464867 KATNBL1Q9H079 304 aa11.31□□□□□ -0.6
APP-213ENST00000464867 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
APP-213ENST00000464867 INSL6Q9Y581 213 aa11.31□□□□□ -0.6
APP-213ENST00000464867 PLXNA3P51805 1871 aa11.31□□□□□ -0.6
APP-213ENST00000464867 NAV1Q8NEY1 1877 aa11.31□□□□□ -0.6
APP-213ENST00000464867 DCHS1Q96JQ0 3298 aa11.3□□□□□ -0.6
APP-213ENST00000464867 ABHD14A-ACY1A0A1B0GW23 586 aa11.3□□□□□ -0.6
APP-213ENST00000464867 PRR23AA6NEV1 266 aa11.3□□□□□ -0.6
APP-213ENST00000464867 ATP2A1O14983 1001 aa11.3□□□□□ -0.6
APP-213ENST00000464867 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
APP-213ENST00000464867 AVPP01185 164 aa11.3□□□□□ -0.6
APP-213ENST00000464867 MYL3P08590 195 aa11.3□□□□□ -0.6
APP-213ENST00000464867 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
APP-213ENST00000464867 AVPR2P30518 371 aa11.3□□□□□ -0.6
APP-213ENST00000464867 ZAP70P43403 619 aa11.3□□□□□ -0.6
APP-213ENST00000464867 CPT1AP50416 773 aa11.3□□□□□ -0.6
APP-213ENST00000464867 DEFB103AP81534 67 aa11.3□□□□□ -0.6
APP-213ENST00000464867 GPM6BQ13491 265 aa11.3□□□□□ -0.6
APP-213ENST00000464867 IKBKEQ14164 716 aa11.3□□□□□ -0.6
APP-213ENST00000464867 FAM117BQ6P1L5 589 aa11.3□□□□□ -0.6
APP-213ENST00000464867 CNKSR3Q6P9H4 555 aa11.3□□□□□ -0.6
APP-213ENST00000464867 CLEC10AQ8IUN9 316 aa11.3□□□□□ -0.6
APP-213ENST00000464867 C17orf80Q9BSJ5 609 aa11.3□□□□□ -0.6
APP-213ENST00000464867 MTG1Q9BT17 334 aaPredicted RBP11.3□□□□□ -0.6
APP-213ENST00000464867 CRNKL1Q9BZJ0 848 aaKnown RBP11.3□□□□□ -0.6
APP-213ENST00000464867 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
APP-213ENST00000464867 MYO15AQ9UKN7 3530 aa11.3□□□□□ -0.6
APP-213ENST00000464867 TPRP12270 2363 aaKnown RBP11.3□□□□□ -0.6
APP-213ENST00000464867 GVINP1Q7Z2Y8 2422 aa11.29□□□□□ -0.6
APP-213ENST00000464867 MAGEB6P1A0A0J9YX57 407 aa11.29□□□□□ -0.6
APP-213ENST00000464867 TTC24A2A3L6 582 aaPredicted RBP11.29□□□□□ -0.6
APP-213ENST00000464867 MBTPS2O43462 519 aa11.29□□□□□ -0.6
APP-213ENST00000464867 AKR1B1P15121 316 aa11.29□□□□□ -0.6
APP-213ENST00000464867 PTPN11Q06124 597 aaPredicted RBP11.29□□□□□ -0.6
APP-213ENST00000464867 SIGLEC14Q08ET2 396 aa11.29□□□□□ -0.6
APP-213ENST00000464867 CLUL1Q15846 466 aa11.29□□□□□ -0.6
APP-213ENST00000464867 NFRKBQ6P4R8 1299 aa11.29□□□□□ -0.6
APP-213ENST00000464867 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
APP-213ENST00000464867 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
APP-213ENST00000464867 CAGE1Q8TC20 777 aa11.29□□□□□ -0.6
APP-213ENST00000464867 AFAP1L1Q8TED9 768 aa11.29□□□□□ -0.6
APP-213ENST00000464867 NKD2Q969F2 451 aaPredicted RBP11.29□□□□□ -0.6
APP-213ENST00000464867 ZNF512BQ96KM6 892 aaPredicted RBP11.29□□□□□ -0.6
APP-213ENST00000464867 FGD4Q96M96 766 aa11.29□□□□□ -0.6
APP-213ENST00000464867 DACH1Q9UI36 760 aa11.29□□□□□ -0.6
APP-213ENST00000464867 COG6Q9Y2V7 657 aa11.29□□□□□ -0.6
APP-213ENST00000464867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.29□□□□□ -0.6
APP-213ENST00000464867 WDR87Q6ZQQ6 2873 aa11.28□□□□□ -0.6
APP-213ENST00000464867 KMT2BQ9UMN6 2715 aaPredicted RBP11.28□□□□□ -0.6
APP-213ENST00000464867 H3BNC9 293 aa11.28□□□□□ -0.6
APP-213ENST00000464867 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
APP-213ENST00000464867 PURAQ00577 322 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms