RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 IFNKQ9P0W0 207 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 FEM1BQ9UK73 627 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 BAZ2BQ9UIF8 2168 aaKnown RBP11.2□□□□□ -0.62
PTPRD-207ENST00000463477 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
PTPRD-207ENST00000463477 NRDCO43847 1150 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 GRK4P32298 578 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 SLC1A4P43007 532 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 MORC3Q14149 939 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 PFKFB3Q16875 520 aaPredicted RBP11.2□□□□□ -0.62
PTPRD-207ENST00000463477 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 GPR142Q7Z601 462 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 CMTR1Q8N1G2 835 aaKnown RBP11.2□□□□□ -0.62
PTPRD-207ENST00000463477 SLF1Q9BQI6 1058 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 TMEM47Q9BQJ4 181 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 SPATC1LQ9H0A9 340 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 VPS54Q9P1Q0 977 aa11.2□□□□□ -0.62
PTPRD-207ENST00000463477 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
PTPRD-207ENST00000463477 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
PTPRD-207ENST00000463477 STRNO43815 780 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 FDX1P10109 184 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 XRCC5P13010 732 aaKnown RBP11.19□□□□□ -0.62
PTPRD-207ENST00000463477 SCG2P13521 617 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 CALML3P27482 149 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 GNAQP50148 359 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 ATP2C1P98194 919 aaPredicted RBP11.19□□□□□ -0.62
PTPRD-207ENST00000463477 TMEM132BQ14DG7 1078 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 PLEKHH3Q7Z736 793 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 CCDC82Q8N4S0 544 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 SRBD1Q8N5C6 995 aaKnown RBP11.19□□□□□ -0.62
PTPRD-207ENST00000463477 SLAIN1Q8ND83 568 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 SHCBP1Q8NEM2 672 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 REPS2Q8NFH8 660 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 ENOX1Q8TC92 643 aaKnown RBP11.19□□□□□ -0.62
PTPRD-207ENST00000463477 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 SOCS4Q8WXH5 440 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 USP6NLQ92738 828 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 SMARCE1Q969G3 411 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 ZNF333Q96JL9 665 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 MOV10L1Q9BXT6 1211 aaKnown RBP11.19□□□□□ -0.62
PTPRD-207ENST00000463477 MAN1B1Q9UKM7 699 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 RLFQ13129 1914 aa11.19□□□□□ -0.62
PTPRD-207ENST00000463477 TMEM232C9JQI7 657 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 ATP2A1O14983 1001 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 ADCY3O60266 1144 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 CAPN15O75808 1086 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 SMC2O95347 1197 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 SLC25A27O95847 323 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 TNNT1P13805 278 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 ERCC5P28715 1186 aaPredicted RBP11.18□□□□□ -0.62
PTPRD-207ENST00000463477 STAT3P40763 770 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 MORN1Q5T089 497 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 FILIP1Q7Z7B0 1213 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 CCAR2Q8N163 923 aaKnown RBP11.18□□□□□ -0.62
PTPRD-207ENST00000463477 CCDC112Q8NEF3 446 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 DCAF4Q8WV16 495 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 CSRNP2Q9H175 543 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 MROH8Q9H579 483 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 SERTAD1Q9UHV2 236 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 ZNF214Q9UL59 606 aaPredicted RBP11.18□□□□□ -0.62
PTPRD-207ENST00000463477 MGAMO43451 1857 aa11.18□□□□□ -0.62
PTPRD-207ENST00000463477 KIAA0100Q14667 2235 aaKnown RBP11.18□□□□□ -0.62
PTPRD-207ENST00000463477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.17□□□□□ -0.62
PTPRD-207ENST00000463477 SLC15A5A6NIM6 579 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
PTPRD-207ENST00000463477 ZBED4O75132 1171 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 SLFN14P0C7P3 912 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 SNHG28P0DPA3 235 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 ZNF18P17022 549 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 ERCC3P19447 782 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 BMP6P22004 513 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTPRD-207ENST00000463477 RGS19P49795 217 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 STAT2P52630 851 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 GRIN1Q05586 938 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 GRM4Q14833 912 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 TPD52L1Q16890 204 aaPredicted RBP11.17□□□□□ -0.62
PTPRD-207ENST00000463477 TTC38Q5R3I4 469 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 ARL6IP4Q66PJ3 421 aaKnown RBP11.17□□□□□ -0.62
PTPRD-207ENST00000463477 GALNT17Q6IS24 598 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 TMC6Q7Z403 805 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 RIOX2Q8IUF8 465 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 SH3TC2Q8TF17 1288 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 SLC38A10Q9HBR0 1119 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 ZSWIM8A7E2V4 1837 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 CCP110O43303 1012 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 COPB2P35606 906 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 OAZ1P54368 228 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 UBASH3AP57075 661 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 MAP2K5Q13163 448 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 GRB14Q14449 540 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 PLS1Q14651 629 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 ARID5BQ14865 1188 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 ARMCX5Q6P1M9 558 aa11.17□□□□□ -0.62
PTPRD-207ENST00000463477 SAMD1Q6SPF0 538 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms