RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 RBM6P78332 1123 aaKnown RBP9.32□□□□□ -0.92
UBE4B-204ENST00000462658 SNW1Q13573 536 aaKnown RBP9.32□□□□□ -0.92
UBE4B-204ENST00000462658 C1orf141Q5JVX7 400 aa9.32□□□□□ -0.92
UBE4B-204ENST00000462658 ANKS3Q6ZW76 656 aa9.32□□□□□ -0.92
UBE4B-204ENST00000462658 IL17REQ8NFR9 667 aa9.32□□□□□ -0.92
UBE4B-204ENST00000462658 BSDC1Q9NW68 430 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-204ENST00000462658 BTG4Q9NY30 223 aa9.32□□□□□ -0.92
UBE4B-204ENST00000462658 PPP1R1BQ9UD71 204 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-204ENST00000462658 ZNF214Q9UL59 606 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-204ENST00000462658 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
UBE4B-204ENST00000462658 RGPD2P0DJD1 1756 aa9.32□□□□□ -0.92
UBE4B-204ENST00000462658 CRB1P82279 1406 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 TMEM265A0A087WTH1 108 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 PLIN1O60240 522 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 ADAMTS4O75173 837 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 BCAR3O75815 825 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 RARSP54136 660 aaKnown RBP9.31□□□□□ -0.92
UBE4B-204ENST00000462658 AOC3Q16853 763 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 ERICH6BQ5W0A0 696 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 UNC5CLQ8IV45 518 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.31□□□□□ -0.92
UBE4B-204ENST00000462658 SREK1Q8WXA9 508 aaKnown RBP9.31□□□□□ -0.92
UBE4B-204ENST00000462658 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 KCNH3Q9ULD8 1083 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 SLC12A7Q9Y666 1083 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 COL5A2P05997 1499 aaPredicted RBP9.31□□□□□ -0.92
UBE4B-204ENST00000462658 DLG5Q8TDM6 1919 aa9.31□□□□□ -0.92
UBE4B-204ENST00000462658 STK10O94804 968 aaKnown RBP9.3□□□□□ -0.92
UBE4B-204ENST00000462658 LRP8Q14114 963 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 TAF7Q15545 349 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-204ENST00000462658 NBPF9Q3BBW0 867 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 GNPTABQ3T906 1256 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 TNNI3KQ59H18 835 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 AXDND1Q5T1B0 1012 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-204ENST00000462658 LARP1BQ659C4 914 aaKnown RBP9.3□□□□□ -0.92
UBE4B-204ENST00000462658 DCAF15Q66K64 600 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 ZNF574Q6ZN55 896 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-204ENST00000462658 CCDC144CPQ8IYA2 1237 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 PIWIL2Q8TC59 973 aaKnown RBP9.3□□□□□ -0.92
UBE4B-204ENST00000462658 BCL7CQ8WUZ0 217 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-204ENST00000462658 HRASLS5Q96KN8 279 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 SEMA3GQ9NS98 782 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 ZSWIM5Q9P217 1185 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 CCDC39Q9UFE4 941 aa9.3□□□□□ -0.92
UBE4B-204ENST00000462658 TRPC5Q9UL62 973 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-204ENST00000462658 PLEKHG2Q9H7P9 1386 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 SHISA3A0PJX4 238 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 RNMTO43148 476 aaKnown RBP9.29□□□□□ -0.92
UBE4B-204ENST00000462658 CLCN7P51798 805 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 PRKCQQ04759 706 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 VPS72Q15906 364 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 TMC3Q7Z5M5 1100 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 SPRED2Q7Z698 418 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 MICAL1Q8TDZ2 1067 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 UBE2FQ969M7 185 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 DUSP15Q9H1R2 295 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-204ENST00000462658 PHAXQ9H814 394 aaKnown RBP9.29□□□□□ -0.92
UBE4B-204ENST00000462658 BABAM1Q9NWV8 329 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 MIS18AQ9NYP9 233 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 TSPYL4Q9UJ04 414 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 SNX11Q9Y5W9 270 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 FAM208AQ9UK61 1670 aaKnown RBP9.29□□□□□ -0.92
UBE4B-204ENST00000462658 PITPNM2Q9BZ72 1349 aa9.29□□□□□ -0.92
UBE4B-204ENST00000462658 WNK3Q9BYP7 1800 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 MEGF6O75095 1541 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 ELL2O00472 640 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-204ENST00000462658 VAMP4O75379 141 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 PRNPP04156 253 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 IL2RBP14784 551 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 PHKG2P15735 406 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 TEFQ10587 303 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 AUHQ13825 339 aaKnown RBP9.28□□□□□ -0.92
UBE4B-204ENST00000462658 SF3A1Q15459 793 aaKnown RBP9.28□□□□□ -0.92
UBE4B-204ENST00000462658 NFXL1Q6ZNB6 911 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 TSPYL6Q8N831 410 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 C8orf58Q8NAV2 365 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 ZCRB1Q8TBF4 217 aaKnown RBP9.28□□□□□ -0.92
UBE4B-204ENST00000462658 KLHL6Q8WZ60 621 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 PRDM14Q9GZV8 571 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 ATP13A1Q9HD20 1204 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 FBXL21Q9UKT6 434 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 MINPP1Q9UNW1 487 aa9.28□□□□□ -0.92
UBE4B-204ENST00000462658 CEMIPQ8WUJ3 1361 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 B2RBV5 119 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 SHOXO15266 292 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 KLF4O43474 513 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.93
UBE4B-204ENST00000462658 SLC7A5Q01650 507 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 TWISTNBQ3B726 338 aaPredicted RBP9.27□□□□□ -0.93
UBE4B-204ENST00000462658 ALDH1L2Q3SY69 923 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 ARTNQ5T4W7 220 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 VHLLQ6RSH7 139 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 WFDC3Q8IUB2 231 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 SSH1Q8WYL5 1049 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 FRAT1Q92837 279 aaPredicted RBP9.27□□□□□ -0.93
UBE4B-204ENST00000462658 GPR62Q9BZJ7 368 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 VAV3Q9UKW4 847 aa9.27□□□□□ -0.93
UBE4B-204ENST00000462658 SLC5A6Q9Y289 635 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms