RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 DNA2P51530 1060 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 GRB10Q13322 594 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 MMS22LQ6ZRQ5 1243 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 KRT25Q7Z3Z0 450 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 TMEM47Q9BQJ4 181 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 NFU1Q9UMS0 254 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 TSPY3P0CV98 308 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 TSPY8P0CW00 308 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 HIBADHP31937 336 aaKnown RBP20.42■□□□□ 0.86
HPS3-204ENST00000462030 NAP1L1P55209 391 aaKnown RBP20.42■□□□□ 0.86
HPS3-204ENST00000462030 SIK1P57059 783 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 HGSNATQ68CP4 663 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 NEK8Q86SG6 692 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 CALML4Q96GE6 196 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 CCDC43Q96MW1 224 aaKnown RBP20.42■□□□□ 0.86
HPS3-204ENST00000462030 NOX5Q96PH1 765 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 SMCO2A6NFE2 343 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 ZPR1O75312 459 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 GUCY2CP25092 1073 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 LRRC55Q6ZSA7 311 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 SV2BQ7L1I2 683 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 CCDC84Q86UT8 332 aaPredicted RBP20.41■□□□□ 0.86
HPS3-204ENST00000462030 GLIS3Q8NEA6 775 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 KLRF2D3W0D1 207 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 TXKP42681 527 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 NNTQ13423 1086 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 TDRD12Q587J7 1177 aaKnown RBP20.41■□□□□ 0.86
HPS3-204ENST00000462030 CACNA2D4Q7Z3S7 1137 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 NLRC4Q9NPP4 1024 aa20.41■□□□□ 0.86
HPS3-204ENST00000462030 HEXIM1O94992 359 aaKnown RBP20.4■□□□□ 0.86
HPS3-204ENST00000462030 PDE4CQ08493 712 aa20.4■□□□□ 0.86
HPS3-204ENST00000462030 FBXW10Q5XX13 1052 aa20.4■□□□□ 0.86
HPS3-204ENST00000462030 UNC13DQ70J99 1090 aa20.4■□□□□ 0.86
HPS3-204ENST00000462030 DZIP1Q86YF9 867 aaKnown RBP20.4■□□□□ 0.86
HPS3-204ENST00000462030 SUGP1Q8IWZ8 645 aaKnown RBP20.4■□□□□ 0.86
HPS3-204ENST00000462030 TBCKQ8TEA7 893 aa20.4■□□□□ 0.86
HPS3-204ENST00000462030 PNMA5Q96PV4 448 aa20.4■□□□□ 0.86
HPS3-204ENST00000462030 EPB41L5Q9HCM4 733 aa20.4■□□□□ 0.86
HPS3-204ENST00000462030 GDF3Q9NR23 364 aa20.4■□□□□ 0.86
HPS3-204ENST00000462030 ZNF233A6NK53 670 aa20.39■□□□□ 0.86
HPS3-204ENST00000462030 NDUFAB1O14561 156 aa20.39■□□□□ 0.86
HPS3-204ENST00000462030 KCNMA1Q12791 1236 aa20.39■□□□□ 0.86
HPS3-204ENST00000462030 LRRC41Q15345 812 aa20.39■□□□□ 0.86
HPS3-204ENST00000462030 CFAP221Q4G0U5 840 aa20.39■□□□□ 0.86
HPS3-204ENST00000462030 TXNRD3Q86VQ6 643 aa20.39■□□□□ 0.86
HPS3-204ENST00000462030 IFT81Q8WYA0 676 aa20.39■□□□□ 0.86
HPS3-204ENST00000462030 GUCY2DQ02846 1103 aa20.39■□□□□ 0.85
HPS3-204ENST00000462030 GLE1Q53GS7 698 aaKnown RBP20.39■□□□□ 0.85
HPS3-204ENST00000462030 IFT20Q8IY31 132 aa20.39■□□□□ 0.85
HPS3-204ENST00000462030 IQCKQ8N0W5 287 aa20.39■□□□□ 0.85
HPS3-204ENST00000462030 GUF1Q8N442 669 aaKnown RBP20.39■□□□□ 0.85
HPS3-204ENST00000462030 SH3RF3Q8TEJ3 882 aaPredicted RBP20.39■□□□□ 0.85
HPS3-204ENST00000462030 TANGO6Q9C0B7 1094 aa20.39■□□□□ 0.85
HPS3-204ENST00000462030 FTCDO95954 541 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 INPP5BP32019 993 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 APBA1Q02410 837 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 BICDL1Q6ZP65 573 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 LARP4BQ92615 738 aaKnown RBP20.38■□□□□ 0.85
HPS3-204ENST00000462030 RNPC3Q96LT9 517 aaKnown RBP20.38■□□□□ 0.85
HPS3-204ENST00000462030 TMEM260Q9NX78 707 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 BIN2Q9UBW5 565 aaPredicted RBP20.38■□□□□ 0.85
HPS3-204ENST00000462030 ZNF652Q9Y2D9 606 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 ABCB11O95342 1321 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 ZEB2O60315 1214 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 TLR2O60603 784 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 PALMO75781 387 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 GUCY2FP51841 1108 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 CFAP58Q5T655 872 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 PIK3R5Q8WYR1 880 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 C6orf50Q9HD87 102 aa20.38■□□□□ 0.85
HPS3-204ENST00000462030 SSU72P8A0A1W2PR75 194 aa20.37■□□□□ 0.85
HPS3-204ENST00000462030 TRADDQ15628 312 aa20.37■□□□□ 0.85
HPS3-204ENST00000462030 ZNF444Q8N0Y2 327 aaPredicted RBP20.37■□□□□ 0.85
HPS3-204ENST00000462030 RNF10Q8N5U6 811 aaKnown RBP20.37■□□□□ 0.85
HPS3-204ENST00000462030 PACSIN2Q9UNF0 486 aaPredicted RBP20.37■□□□□ 0.85
HPS3-204ENST00000462030 PVALEFA0A1B0GWK0 134 aa20.37■□□□□ 0.85
HPS3-204ENST00000462030 LRRC63Q05C16 580 aa20.37■□□□□ 0.85
HPS3-204ENST00000462030 KCNV1Q6PIU1 500 aa20.37■□□□□ 0.85
HPS3-204ENST00000462030 SPZ1Q9BXG8 430 aa20.37■□□□□ 0.85
HPS3-204ENST00000462030 VAT1LQ9HCJ6 419 aa20.37■□□□□ 0.85
HPS3-204ENST00000462030 ZNF335Q9H4Z2 1342 aaPredicted RBP20.37■□□□□ 0.85
HPS3-204ENST00000462030 ROBO3Q96MS0 1386 aa20.37■□□□□ 0.85
HPS3-204ENST00000462030 POTEMA6NI47 508 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 RBAK-RBAKDNI3L0D1 243 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 FGFR1OPO95684 399 aaKnown RBP20.36■□□□□ 0.85
HPS3-204ENST00000462030 RNASE9P60153 205 aaKnown RBP20.36■□□□□ 0.85
HPS3-204ENST00000462030 GUCY1A3Q02108 690 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 PAK2Q13177 524 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 USP17L2Q6R6M4 530 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 CASKIN2Q8WXE0 1202 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 KRT12Q99456 494 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 NUDT12Q9BQG2 462 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 TSKSQ9UJT2 592 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 NOL4O94818 638 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 KDM7AQ6ZMT4 941 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 KCNK18Q7Z418 384 aa20.36■□□□□ 0.85
HPS3-204ENST00000462030 SLC37A4O43826 429 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 RASA1P20936 1047 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 KLRC1P26715 233 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms