RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DDX1Q92499 740 aaKnown RBP4.23□□□□□ -1.73
HDAC6-212ENST00000461608 UBE2FQ969M7 185 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 HSPA12BQ96MM6 686 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 CLUHP3Q96NS8 147 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 ORAI3Q9BRQ5 295 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 PHF20Q9BVI0 1012 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 TARS2Q9BW92 718 aaKnown RBP4.23□□□□□ -1.73
HDAC6-212ENST00000461608 CDADC1Q9BWV3 514 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 CARS2Q9HA77 564 aaKnown RBP4.23□□□□□ -1.73
HDAC6-212ENST00000461608 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.22□□□□□ -1.73
HDAC6-212ENST00000461608 ARVCFO00192 962 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 BRINP1O60477 761 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 PLS3P13797 630 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 GLDCP23378 1020 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 CORO7P57737 925 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 SF1Q15637 639 aaKnown RBP4.22□□□□□ -1.73
HDAC6-212ENST00000461608 RTP2Q5QGT7 225 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 ZCCHC8Q6NZY4 707 aaKnown RBP4.22□□□□□ -1.73
HDAC6-212ENST00000461608 PRRT2Q7Z6L0 340 aaPredicted RBP4.22□□□□□ -1.73
HDAC6-212ENST00000461608 KIF18BQ86Y91 864 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 AFAP1L2Q8N4X5 818 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 USHBP1Q8N6Y0 703 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 SLC7A14Q8TBB6 771 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 FRS2Q8WU20 508 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 PTCHD1Q96NR3 888 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 CEP89Q96ST8 783 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 MCMBPQ9BTE3 642 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 FOXP3Q9BZS1 431 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 IRF2BPLQ9H1B7 796 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 TMPRSS5Q9H3S3 457 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 ZSWIM5Q9P217 1185 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 SMG5Q9UPR3 1016 aaKnown RBP4.22□□□□□ -1.73
HDAC6-212ENST00000461608 ATP8A1Q9Y2Q0 1164 aa4.22□□□□□ -1.73
HDAC6-212ENST00000461608 TCRBV16S1A1N1A0A5B0 115 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 WASH4PA8MWX3 477 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 WNT9AO14904 365 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 KIR2DL1P43626 348 aaPredicted RBP4.21□□□□□ -1.74
HDAC6-212ENST00000461608 KIR2DL2P43627 348 aaPredicted RBP4.21□□□□□ -1.74
HDAC6-212ENST00000461608 LINC00310P59036 64 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 OCRLQ01968 901 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 GUCY1A3Q02108 690 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 EGR3Q06889 387 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 CYP4F3Q08477 520 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 PAK1Q13153 545 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 RGL3Q3MIN7 710 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 HLA-DQA1Q5Y7H0 255 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 CNNM4Q6P4Q7 775 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 LBX2Q6XYB7 198 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 DDX46Q7L014 1031 aaKnown RBP4.21□□□□□ -1.74
HDAC6-212ENST00000461608 NECAB2Q7Z6G3 386 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 CREG2Q8IUH2 290 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 OR2W6PQ8NHA6 318 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 CELF4Q9BZC1 486 aaKnown RBP4.21□□□□□ -1.74
HDAC6-212ENST00000461608 CD320Q9NPF0 282 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 HOMER2Q9NSB8 354 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 ERVK13-1Q9NX77 482 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 CLEC1BQ9P126 229 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 TNFRSF10DQ9UBN6 386 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 MINPP1Q9UNW1 487 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 APOBEC2Q9Y235 224 aaKnown RBP4.21□□□□□ -1.74
HDAC6-212ENST00000461608 PCDHA11Q9Y5I1 949 aa4.21□□□□□ -1.74
HDAC6-212ENST00000461608 TNPO3Q9Y5L0 923 aaKnown RBP4.21□□□□□ -1.74
HDAC6-212ENST00000461608 A0A1W2PQ45 241 aaPredicted RBP4.2□□□□□ -1.74
HDAC6-212ENST00000461608 A0A1W2PQY0 241 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 TMEM82A0PJX8 343 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 FAM47E-STBD1D6RA91 191 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 H7BY64 318 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 RFXAPO00287 272 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 NPHS1O60500 1241 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 SASH1O94885 1247 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 CRTAMO95727 393 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 JMJD7P0C870 316 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 MED14OSP0DP75 135 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 SDSP20132 328 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 GRK2P25098 689 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 GRK3P35626 688 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 GDNFP39905 211 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 NEK4P51957 841 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 RPL11P62913 178 aaKnown RBP4.2□□□□□ -1.74
HDAC6-212ENST00000461608 NFKB2Q00653 900 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 EXOSC10Q01780 885 aaKnown RBP4.2□□□□□ -1.74
HDAC6-212ENST00000461608 TEKQ02763 1124 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 CHRNEQ04844 493 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 SART3Q15020 963 aaKnown RBP4.2□□□□□ -1.74
HDAC6-212ENST00000461608 CFAP100Q494V2 611 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 TCERG1LQ5VWI1 586 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 WAPLQ7Z5K2 1190 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 FGD2Q7Z6J4 655 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 TMEM151BQ8IW70 566 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 ZC3H7AQ8IWR0 971 aaKnown RBP4.2□□□□□ -1.74
HDAC6-212ENST00000461608 RPUSD2Q8IZ73 545 aaKnown RBP4.2□□□□□ -1.74
HDAC6-212ENST00000461608 Q8N1Y9 231 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 ANKS4BQ8N8V4 417 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 PRPF38AQ8NAV1 312 aaKnown RBP4.2□□□□□ -1.74
HDAC6-212ENST00000461608 SCYL1Q96KG9 808 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 TTC1Q99614 292 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 CABP5Q9NP86 173 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 GPRC5CQ9NQ84 441 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 AP5S1Q9NUS5 200 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms