RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 EP400NLQ6ZTU2 488 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 C7orf31Q8N865 590 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 AFG1LQ8WV93 481 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 CLEC4DQ8WXI8 215 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 DHX38Q92620 1227 aaKnown RBP20.27■□□□□ 0.84
TOP3A-202ENST00000461127 SAMD11Q96NU1 681 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 CTAGE1Q96RT6 745 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 C17orf80Q9BSJ5 609 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 MFSD14AQ96MC6 490 aa20.26■□□□□ 0.83
TOP3A-202ENST00000461127 GTF2IRD1Q9UHL9 959 aa20.26■□□□□ 0.83
TOP3A-202ENST00000461127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.26■□□□□ 0.83
TOP3A-202ENST00000461127 WDFY4Q6ZS81 3184 aa20.26■□□□□ 0.83
TOP3A-202ENST00000461127 ARIH2O95376 493 aa20.25■□□□□ 0.83
TOP3A-202ENST00000461127 AMHP03971 560 aa20.25■□□□□ 0.83
TOP3A-202ENST00000461127 PTK7Q13308 1070 aa20.25■□□□□ 0.83
TOP3A-202ENST00000461127 DGKDQ16760 1214 aa20.25■□□□□ 0.83
TOP3A-202ENST00000461127 BANK1Q8NDB2 785 aa20.25■□□□□ 0.83
TOP3A-202ENST00000461127 PABPC5Q96DU9 382 aaKnown RBP20.25■□□□□ 0.83
TOP3A-202ENST00000461127 KATNAL1Q9BW62 490 aa20.25■□□□□ 0.83
TOP3A-202ENST00000461127 LGR5O75473 907 aa20.24■□□□□ 0.83
TOP3A-202ENST00000461127 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
TOP3A-202ENST00000461127 ZP2Q05996 745 aa20.24■□□□□ 0.83
TOP3A-202ENST00000461127 CCDC62Q6P9F0 684 aa20.24■□□□□ 0.83
TOP3A-202ENST00000461127 CHST3Q7LGC8 479 aa20.24■□□□□ 0.83
TOP3A-202ENST00000461127 MYOCDQ8IZQ8 938 aa20.24■□□□□ 0.83
TOP3A-202ENST00000461127 KAT2BQ92831 832 aa20.24■□□□□ 0.83
TOP3A-202ENST00000461127 GPCPD1Q9NPB8 672 aa20.24■□□□□ 0.83
TOP3A-202ENST00000461127 FRMPD2Q68DX3 1309 aaPredicted RBP20.24■□□□□ 0.83
TOP3A-202ENST00000461127 EMSYQ7Z589 1322 aa20.24■□□□□ 0.83
TOP3A-202ENST00000461127 ZNF318Q5VUA4 2279 aa20.23■□□□□ 0.83
TOP3A-202ENST00000461127 TOP1P11387 765 aaKnown RBP20.23■□□□□ 0.83
TOP3A-202ENST00000461127 CTDSPL2Q05D32 466 aa20.23■□□□□ 0.83
TOP3A-202ENST00000461127 TCTN1Q2MV58 587 aa20.23■□□□□ 0.83
TOP3A-202ENST00000461127 EPC2Q52LR7 807 aa20.23■□□□□ 0.83
TOP3A-202ENST00000461127 SEPT14Q6ZU15 432 aa20.23■□□□□ 0.83
TOP3A-202ENST00000461127 ADHFE1Q8IWW8 467 aa20.23■□□□□ 0.83
TOP3A-202ENST00000461127 SEC62Q99442 399 aaKnown RBP20.23■□□□□ 0.83
TOP3A-202ENST00000461127 HDAC6Q9UBN7 1215 aa20.23■□□□□ 0.83
TOP3A-202ENST00000461127 WDR19Q8NEZ3 1342 aa20.23■□□□□ 0.83
TOP3A-202ENST00000461127 NEFLP07196 543 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 NOVP48745 357 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 PSEN2P49810 448 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 HTRA4P83105 476 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-202ENST00000461127 ARHGAP1Q07960 439 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 GPM6BQ13491 265 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 LY6KQ17RY6 165 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 ZNF618Q5T7W0 954 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 TSHZ3Q63HK5 1081 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.22■□□□□ 0.83
TOP3A-202ENST00000461127 HFE2Q6ZVN8 426 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 POP1Q99575 1024 aaKnown RBP20.22■□□□□ 0.83
TOP3A-202ENST00000461127 ALG1Q9BT22 464 aa20.22■□□□□ 0.83
TOP3A-202ENST00000461127 NSUN3Q9H649 340 aaKnown RBP20.22■□□□□ 0.83
TOP3A-202ENST00000461127 MICAL3Q7RTP6 2002 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 C19orf67A6NJJ6 358 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 H3BNC9 293 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 NCK2O43639 380 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 TCEAL5Q5H9L2 206 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 SP7Q8TDD2 431 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-202ENST00000461127 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 TOMM22Q9NS69 142 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 CLDND1Q9NY35 253 aa20.21■□□□□ 0.83
TOP3A-202ENST00000461127 MFSD10Q14728 455 aa20.2■□□□□ 0.82
TOP3A-202ENST00000461127 KIAA0753Q2KHM9 967 aa20.2■□□□□ 0.82
TOP3A-202ENST00000461127 DHX37Q8IY37 1157 aaKnown RBP20.2■□□□□ 0.82
TOP3A-202ENST00000461127 YME1L1Q96TA2 773 aa20.2■□□□□ 0.82
TOP3A-202ENST00000461127 TMEM47Q9BQJ4 181 aa20.2■□□□□ 0.82
TOP3A-202ENST00000461127 FSD1Q9BTV5 496 aa20.2■□□□□ 0.82
TOP3A-202ENST00000461127 MAF1Q9H063 256 aa20.2■□□□□ 0.82
TOP3A-202ENST00000461127 ORC4O43929 436 aa20.19■□□□□ 0.82
TOP3A-202ENST00000461127 STXBP2Q15833 593 aa20.19■□□□□ 0.82
TOP3A-202ENST00000461127 TRIM71Q2Q1W2 868 aaKnown RBP20.19■□□□□ 0.82
TOP3A-202ENST00000461127 USH1GQ495M9 461 aa20.19■□□□□ 0.82
TOP3A-202ENST00000461127 ZMYM1Q5SVZ6 1142 aa20.19■□□□□ 0.82
TOP3A-202ENST00000461127 DBF4BQ8NFT6 615 aa20.19■□□□□ 0.82
TOP3A-202ENST00000461127 NSUN6Q8TEA1 469 aaKnown RBP20.19■□□□□ 0.82
TOP3A-202ENST00000461127 ANAPC4Q9UJX5 808 aa20.19■□□□□ 0.82
TOP3A-202ENST00000461127 PDHBP11177 359 aa20.18■□□□□ 0.82
TOP3A-202ENST00000461127 IRS1P35568 1242 aa20.18■□□□□ 0.82
TOP3A-202ENST00000461127 LAMC2Q13753 1193 aa20.18■□□□□ 0.82
TOP3A-202ENST00000461127 MBTPS1Q14703 1052 aa20.18■□□□□ 0.82
TOP3A-202ENST00000461127 COL19A1Q14993 1142 aa20.18■□□□□ 0.82
TOP3A-202ENST00000461127 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
TOP3A-202ENST00000461127 TMEM192Q8IY95 271 aa20.18■□□□□ 0.82
TOP3A-202ENST00000461127 EMID1Q96A84 441 aaPredicted RBP20.18■□□□□ 0.82
TOP3A-202ENST00000461127 IWS1Q96ST2 819 aa20.18■□□□□ 0.82
TOP3A-202ENST00000461127 RSPH10B2B2RC85 870 aa20.17■□□□□ 0.82
TOP3A-202ENST00000461127 F2P00734 622 aa20.17■□□□□ 0.82
TOP3A-202ENST00000461127 RSPH10BP0C881 870 aa20.17■□□□□ 0.82
TOP3A-202ENST00000461127 THPOP40225 353 aa20.17■□□□□ 0.82
TOP3A-202ENST00000461127 ZNF543Q08ER8 600 aa20.17■□□□□ 0.82
TOP3A-202ENST00000461127 RRP12Q5JTH9 1297 aaKnown RBP20.17■□□□□ 0.82
TOP3A-202ENST00000461127 FBXO11Q86XK2 927 aa20.17■□□□□ 0.82
TOP3A-202ENST00000461127 PPTC7Q8NI37 304 aa20.17■□□□□ 0.82
TOP3A-202ENST00000461127 KIAA1217Q5T5P2 1943 aa20.16■□□□□ 0.82
TOP3A-202ENST00000461127 ZNF286BP0CG31 522 aa20.16■□□□□ 0.82
TOP3A-202ENST00000461127 SMAD2Q15796 467 aaKnown RBP20.16■□□□□ 0.82
TOP3A-202ENST00000461127 PLEKHG4Q58EX7 1191 aa20.16■□□□□ 0.82
TOP3A-202ENST00000461127 HERC4Q5GLZ8 1057 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms