RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 SERPINA10Q9UK55 444 aa6.82□□□□□ -1.32
PTPN12-209ENST00000460731 RFX7Q2KHR2 1363 aa6.82□□□□□ -1.32
PTPN12-209ENST00000460731 GPR75-ASB3A0A0A6YYF3 556 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 SOX1O00570 391 aaPredicted RBP6.81□□□□□ -1.32
PTPN12-209ENST00000460731 CYP26A1O43174 497 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 DDNO94850 711 aaPredicted RBP6.81□□□□□ -1.32
PTPN12-209ENST00000460731 PRDX5P30044 214 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 GMPSP49915 693 aaPredicted RBP6.81□□□□□ -1.32
PTPN12-209ENST00000460731 TSHZ3Q63HK5 1081 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 APOBEC3HQ6NTF7 200 aaKnown RBP6.81□□□□□ -1.32
PTPN12-209ENST00000460731 VN1R5Q7Z5H4 357 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 C12orf50Q8NA57 414 aaPredicted RBP6.81□□□□□ -1.32
PTPN12-209ENST00000460731 C2CD4AQ8NCU7 369 aaPredicted RBP6.81□□□□□ -1.32
PTPN12-209ENST00000460731 AGBL5Q8NDL9 886 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 EDC3Q96F86 508 aaKnown RBP6.81□□□□□ -1.32
PTPN12-209ENST00000460731 MXD3Q9BW11 206 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 CYP4F12Q9HCS2 524 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 PRKAG2Q9UGJ0 569 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 ZMIZ1Q9ULJ6 1067 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 WDR90Q96KV7 1748 aa6.81□□□□□ -1.32
PTPN12-209ENST00000460731 DOCK2Q92608 1830 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 MAST3O60307 1309 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 GOLIM4O00461 696 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 FRAT2O75474 233 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 LDHBP07195 334 aaKnown RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 ZFYP08048 801 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 SDSP20132 328 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 ADD2P35612 726 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 ARL4DP49703 201 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 MECOMQ03112 1051 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 MAP3K12Q12852 859 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 ELOAQ14241 798 aaKnown RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 FKBP1CQ5VVH2 108 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 ERICH6Q7L0X2 663 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 SKAP1Q86WV1 359 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 TMEM102Q8N9M5 508 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 FBLIM1Q8WUP2 373 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 SOX17Q9H6I2 414 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 CXXC1Q9P0U4 656 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 CNOT7Q9UIV1 285 aaKnown RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 MYO5AQ9Y4I1 1855 aaKnown RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-209ENST00000460731 SCN4AP35499 1836 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 MYH13Q9UKX3 1938 aa6.8□□□□□ -1.32
PTPN12-209ENST00000460731 RNF113AO15541 343 aaKnown RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 TRPA1O75762 1119 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 LDHCP07864 332 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 DRD2P14416 443 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 VEGFAP15692 232 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 PDE6AP16499 860 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 EPS15P42566 896 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 RHBDL3P58872 404 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 GSTO1P78417 241 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 CHAF1AQ13111 956 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 NAA30Q147X3 362 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 NFKBIBQ15653 356 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 FBLN7Q53RD9 439 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 SLC9C2Q5TAH2 1124 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 SPOCD1Q6ZMY3 1216 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 USP50Q70EL3 339 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 ADGRA1Q86SQ6 560 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 CERS3Q8IU89 383 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 WFDC3Q8IUB2 231 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 C1orf127Q8N9H9 656 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 FLCNQ8NFG4 579 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 NXPE3Q969Y0 559 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 PRMT6Q96LA8 375 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 RIOK1Q9BRS2 568 aaKnown RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.79□□□□□ -1.327e-13■■■□□ 17.2
PTPN12-209ENST00000460731 TAF1DQ9H5J8 278 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 LRP2BPQ9P2M1 347 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 TTF2Q9UNY4 1162 aaKnown RBP6.79□□□□□ -1.32
PTPN12-209ENST00000460731 DAGLAQ9Y4D2 1042 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 TIAM2Q8IVF5 1701 aa6.79□□□□□ -1.32
PTPN12-209ENST00000460731 SHTN1A0MZ66 631 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 IQCA1LA6NCM1 817 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 FAM170BA6NMN3 283 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 H7C1D1 291 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 HIP1O00291 1037 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 WNT10BO00744 389 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 RFX1P22670 979 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 CHMLP26374 656 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 CRKP46108 304 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
PTPN12-209ENST00000460731 EXOSC6Q5RKV6 272 aaKnown RBP6.78□□□□□ -1.32
PTPN12-209ENST00000460731 ZNF648Q5T619 568 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-209ENST00000460731 ZSCAN25Q6NSZ9 544 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 ZNF438Q7Z4V0 828 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 PNMA8AQ86V59 439 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-209ENST00000460731 KIAA0825Q8IV33 1275 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 CNTROBQ8N137 903 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 BSNDQ8WZ55 320 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 APPBP2Q92624 585 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 OSBP2Q969R2 916 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 TEKT1Q969V4 418 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 DNAJC2Q99543 621 aaKnown RBP6.78□□□□□ -1.32
PTPN12-209ENST00000460731 IDI2Q9BXS1 227 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 CHRDQ9H2X0 955 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 MYOZ2Q9NPC6 264 aa6.78□□□□□ -1.32
PTPN12-209ENST00000460731 HELLSQ9NRZ9 838 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms