RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 GOLGA8IPA6NC78 632 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 GOLGA8JA6NMD2 632 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 H0YCG3 227 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 SART1O43290 800 aaKnown RBP17.42■□□□□ 0.38
HDAC7-217ENST00000459625 TEX2Q8IWB9 1127 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 TMCO5AQ8N6Q1 288 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 AFG1LQ8WV93 481 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 KLHL14Q9P2G3 628 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 LARSQ9P2J5 1176 aaKnown RBP17.42■□□□□ 0.38
HDAC7-217ENST00000459625 DENND3A2RUS2 1198 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 TOM1L1O75674 476 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 ATL3Q6DD88 541 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 TNKSO95271 1327 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 ARL4AP40617 200 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 DYNLL1P63167 89 aaKnown RBP17.42■□□□□ 0.38
HDAC7-217ENST00000459625 PGBD3Q8N328 593 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 KRT1P04264 644 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 RECQLP46063 649 aaPredicted RBP17.42■□□□□ 0.38
HDAC7-217ENST00000459625 MFAP3P55082 362 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 TRIM67Q6ZTA4 783 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 CCDC84Q86UT8 332 aaPredicted RBP17.42■□□□□ 0.38
HDAC7-217ENST00000459625 CACTINQ8WUQ7 758 aaKnown RBP17.42■□□□□ 0.38
HDAC7-217ENST00000459625 KCNQ3O43525 872 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 SMC5Q8IY18 1101 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 OR6B3Q8NGW1 331 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 ZWILCHQ9H900 591 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 TPX2Q9ULW0 747 aaKnown RBP17.41■□□□□ 0.38
HDAC7-217ENST00000459625 WDR91A4D1P6 747 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 RASSF7Q02833 373 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 NT5C1BQ96P26 610 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
HDAC7-217ENST00000459625 SERPINB2P05120 415 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 MAPK4P31152 587 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 LRRC8CQ8TDW0 803 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 LLPHQ9BRT6 129 aaKnown RBP17.41■□□□□ 0.38
HDAC7-217ENST00000459625 PCF11O94913 1555 aaKnown RBP17.41■□□□□ 0.38
HDAC7-217ENST00000459625 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 UHRF1BP1Q6BDS2 1440 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 GOLGA5Q8TBA6 731 aa17.41■□□□□ 0.38
HDAC7-217ENST00000459625 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
HDAC7-217ENST00000459625 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
HDAC7-217ENST00000459625 ZNF75DP51815 510 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 USP14P54578 494 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 FRA10AC1Q70Z53 315 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 KDM2BQ8NHM5 1336 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 CYP4F22Q6NT55 531 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 TSKSQ9UJT2 592 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 ADD1P35611 737 aaKnown RBP17.4■□□□□ 0.38
HDAC7-217ENST00000459625 IFNAR2P48551 515 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 COA7Q96BR5 231 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 CFLARO15519 480 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 GOLGA8FQ08AF8 430 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 GOLGA8DPQ0D2H9 430 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 DEPDC1BQ8WUY9 529 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 ATP6V0A1Q93050 837 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 KIAA0586Q9BVV6 1533 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 TRPA1O75762 1119 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 MXD4Q14582 209 aaPredicted RBP17.4■□□□□ 0.38
HDAC7-217ENST00000459625 EXOC3L4Q17RC7 722 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 NLGN1Q8N2Q7 840 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 FBXL13Q8NEE6 735 aa17.4■□□□□ 0.38
HDAC7-217ENST00000459625 SCHIP1Q9P0W5 487 aaPredicted RBP17.4■□□□□ 0.38
HDAC7-217ENST00000459625 MAP3K7O43318 606 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 C21orf2O43822 256 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 YAF2Q8IY57 180 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 TBK1Q9UHD2 729 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 MYO1EQ12965 1108 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 TMED2Q15363 201 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 MAP3K21Q5TCX8 1036 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 NUDCD1Q96RS6 583 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 GREM2Q9H772 168 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 TRPC5Q9UL62 973 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-217ENST00000459625 SAR1BQ9Y6B6 198 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 TRPM2O94759 1503 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 SEC24BO95487 1268 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 SCG2P13521 617 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
HDAC7-217ENST00000459625 ARHGDIAP52565 204 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.37
HDAC7-217ENST00000459625 POLR3EQ9NVU0 708 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 FRMD3A2A2Y4 597 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 EEF1B2P24534 225 aaKnown RBP17.39■□□□□ 0.37
HDAC7-217ENST00000459625 TLK1Q9UKI8 766 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 SBNO1A3KN83 1393 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 MYO1FO00160 1098 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 ZBTB7AO95365 584 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 RPN1P04843 607 aaKnown RBP17.39■□□□□ 0.37
HDAC7-217ENST00000459625 OAS2P29728 719 aaKnown RBP17.39■□□□□ 0.37
HDAC7-217ENST00000459625 CACNB2Q08289 660 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-217ENST00000459625 EHHADHQ08426 723 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 CAPRIN1Q14444 709 aaKnown RBP17.39■□□□□ 0.37
HDAC7-217ENST00000459625 CLCA2Q9UQC9 943 aa17.39■□□□□ 0.37
HDAC7-217ENST00000459625 NEURL1BA8MQ27 555 aa17.38■□□□□ 0.37
HDAC7-217ENST00000459625 UBE2SQ16763 222 aa17.38■□□□□ 0.37
HDAC7-217ENST00000459625 PDXDC2PQ6P474 469 aa17.38■□□□□ 0.37
HDAC7-217ENST00000459625 LZICQ8WZA0 190 aa17.38■□□□□ 0.37
HDAC7-217ENST00000459625 GDAQ9Y2T3 454 aa17.38■□□□□ 0.37
HDAC7-217ENST00000459625 NCF2P19878 526 aaPredicted RBP17.38■□□□□ 0.37
HDAC7-217ENST00000459625 EFCAB13Q8IY85 973 aa17.38■□□□□ 0.37
HDAC7-217ENST00000459625 ERO1AQ96HE7 468 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms