RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MARCH10Q8NA82 808 aaPredicted RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 TCP11Q8WWU5 503 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 INTS9Q9NV88 658 aaKnown RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 FAF1Q9UNN5 650 aaPredicted RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 SOS2Q07890 1332 aaPredicted RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 ZNF518AQ6AHZ1 1483 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 ASPHQ12797 758 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 GPR162Q16538 588 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 PIGSQ96S52 555 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 SEC31BQ9NQW1 1179 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 TYW1Q9NV66 732 aaKnown RBP21.37■■□□□ 1.01
SNX27-204ENST00000458013 NXF1Q9UBU9 619 aaKnown RBP21.37■■□□□ 1.01
SNX27-204ENST00000458013 H2AFZP0C0S5 128 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 H2AFVQ71UI9 128 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 MIGA2Q7L4E1 593 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 PDCD7Q8N8D1 485 aaKnown RBP21.37■■□□□ 1.01
SNX27-204ENST00000458013 PPWD1Q96BP3 646 aaKnown RBP21.37■■□□□ 1.01
SNX27-204ENST00000458013 NVLO15381 856 aaKnown RBP21.37■■□□□ 1.01
SNX27-204ENST00000458013 DYNLL2Q96FJ2 89 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 CARMIL3Q8ND23 1372 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 MFAP3P55082 362 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 CDO1Q16878 200 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 PIP4K2CQ8TBX8 421 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 LSG1Q9H089 658 aaKnown RBP21.37■■□□□ 1.01
SNX27-204ENST00000458013 ZWILCHQ9H900 591 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 PPP1R9AQ9ULJ8 1098 aa21.37■■□□□ 1.01
SNX27-204ENST00000458013 TCP11X2Q5H9J9 407 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 BAG5Q9UL15 447 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 SFI1A8K8P3 1242 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 DARS2Q6PI48 645 aaKnown RBP21.36■■□□□ 1.01
SNX27-204ENST00000458013 IL17REQ8NFR9 667 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 SLC38A10Q9HBR0 1119 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 CFLARO15519 480 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 SGO2Q562F6 1265 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 KCTD6Q8NC69 237 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 RPS6KC1Q96S38 1066 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 TRIM4Q9C037 500 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 VCX3AQ9NNX9 186 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 SAMSN1Q9NSI8 373 aaKnown RBP21.36■■□□□ 1.01
SNX27-204ENST00000458013 COL4A3BPQ9Y5P4 624 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 MGEA5O60502 916 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 RNF8O76064 485 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.36■■□□□ 1.01
SNX27-204ENST00000458013 TSR3Q9UJK0 312 aaKnown RBP21.36■■□□□ 1.01
SNX27-204ENST00000458013 CPP00450 1065 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 NCF2P19878 526 aaPredicted RBP21.36■■□□□ 1.01
SNX27-204ENST00000458013 RASEFQ8IZ41 740 aa21.36■■□□□ 1.01
SNX27-204ENST00000458013 GSTA4O15217 222 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 PER1O15534 1290 aaPredicted RBP21.35■■□□□ 1.01
SNX27-204ENST00000458013 ZBTB38Q8NAP3 1195 aaPredicted RBP21.35■■□□□ 1.01
SNX27-204ENST00000458013 FAM149B1Q96BN6 582 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 SDCCAG3Q96C92 435 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 A6NNZ2 444 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 HEXIM1O94992 359 aaKnown RBP21.35■■□□□ 1.01
SNX27-204ENST00000458013 PDE6BP35913 854 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 NR5A1Q13285 461 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 PPP2R5BQ15173 497 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 TUBB8Q3ZCM7 444 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 RASIP1Q5U651 963 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 KMT5AQ9NQR1 393 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 PLS3P13797 630 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 ABTB1Q969K4 478 aaPredicted RBP21.35■■□□□ 1.01
SNX27-204ENST00000458013 PCDHA4Q9UN74 947 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 N4BP1O75113 896 aaKnown RBP21.35■■□□□ 1.01
SNX27-204ENST00000458013 NLRP7Q8WX94 980 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 ANKRD36BP1Q96IX9 119 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 TFAMQ00059 246 aaKnown RBP21.35■■□□□ 1.01
SNX27-204ENST00000458013 DNAAF3Q8N9W5 541 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 SPC25Q9HBM1 224 aa21.35■■□□□ 1.01
SNX27-204ENST00000458013 APOEP02649 317 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 DDAH1O94760 285 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 HOXA13P31271 388 aaPredicted RBP21.34■■□□□ 1.01
SNX27-204ENST00000458013 KIF11P52732 1056 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 SLFNL1Q499Z3 407 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 DEPDC1BQ8WUY9 529 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 GPC4O75487 556 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 ARHGAP4P98171 946 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 LARP4BQ92615 738 aaKnown RBP21.34■■□□□ 1.01
SNX27-204ENST00000458013 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
SNX27-204ENST00000458013 INO80B-WBP1J3KQ70 363 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 PPEF1O14829 653 aaPredicted RBP21.34■■□□□ 1.01
SNX27-204ENST00000458013 PTK2Q05397 1052 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 ZNF449Q6P9G9 518 aa21.34■■□□□ 1.01
SNX27-204ENST00000458013 INO80BQ9C086 356 aaPredicted RBP21.34■■□□□ 1.01
SNX27-204ENST00000458013 EIF4E1BA6NMX2 242 aaKnown RBP21.34■■□□□ 1.01
SNX27-204ENST00000458013 AFPP02771 609 aaKnown RBP21.33■■□□□ 1.01
SNX27-204ENST00000458013 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.33■■□□□ 1.01
SNX27-204ENST00000458013 MUM1L1Q5H9M0 696 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 TBCKQ8TEA7 893 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 BCAP29Q9UHQ4 241 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 PCDHA5Q9Y5H7 936 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 PHKG2P15735 406 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 ERFEQ4G0M1 354 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 CALN1Q9BXU9 219 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 GCNT4Q9P109 453 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 FMNL1O95466 1100 aaPredicted RBP21.33■■□□□ 1.01
SNX27-204ENST00000458013 SSTR3P32745 418 aaPredicted RBP21.33■■□□□ 1.01
SNX27-204ENST00000458013 MTERF2Q49AM1 385 aa21.33■■□□□ 1.01
SNX27-204ENST00000458013 C10orf76Q5T2E6 689 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms