RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MARCH6O60337 910 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 PRKCSHP14314 528 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-202ENST00000457422 H2AFXP16104 143 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-202ENST00000457422 SNAP25P60880 206 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 JAG1P78504 1218 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 ECM1Q16610 540 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 DDX12PQ92771 950 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 EEF2KMTQ96G04 330 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 AMNQ9BXJ7 453 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 LZTFL1Q9NQ48 299 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 NDUFB10O96000 172 aa18.6■□□□□ 0.57
CCDC43-202ENST00000457422 MIIPQ5JXC2 388 aa18.6■□□□□ 0.57
CCDC43-202ENST00000457422 ACRBPQ8NEB7 543 aa18.6■□□□□ 0.57
CCDC43-202ENST00000457422 PRMT6Q96LA8 375 aaPredicted RBP18.6■□□□□ 0.57
CCDC43-202ENST00000457422 ERGIC2Q96RQ1 377 aa18.6■□□□□ 0.57
CCDC43-202ENST00000457422 CARD6Q9BX69 1037 aa18.6■□□□□ 0.57
CCDC43-202ENST00000457422 GH2P01242 217 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 MMP14P50281 582 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 RRP1BQ14684 758 aaKnown RBP18.59■□□□□ 0.57
CCDC43-202ENST00000457422 FIGNQ5HY92 759 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 BTNL9Q6UXG8 535 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 UBXN4Q92575 508 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 IQCDQ96DY2 449 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 IRX2Q9BZI1 471 aaPredicted RBP18.59■□□□□ 0.57
CCDC43-202ENST00000457422 C21orf2O43822 256 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 MTIF2P46199 727 aaKnown RBP18.59■□□□□ 0.57
CCDC43-202ENST00000457422 EZH2Q15910 746 aaKnown RBP18.59■□□□□ 0.57
CCDC43-202ENST00000457422 MEA1Q16626 185 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 DNAJC19Q96DA6 116 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 UIMC1Q96RL1 719 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
CCDC43-202ENST00000457422 DDX41Q9UJV9 622 aaKnown RBP18.59■□□□□ 0.57
CCDC43-202ENST00000457422 FGFR1OPO95684 399 aaKnown RBP18.58■□□□□ 0.57
CCDC43-202ENST00000457422 TBC1D8BQ0IIM8 1120 aa18.58■□□□□ 0.57
CCDC43-202ENST00000457422 GRIPAP1Q4V328 841 aa18.58■□□□□ 0.57
CCDC43-202ENST00000457422 ARHGAP29Q52LW3 1261 aa18.58■□□□□ 0.57
CCDC43-202ENST00000457422 RBM26Q5T8P6 1007 aaKnown RBP18.58■□□□□ 0.57
CCDC43-202ENST00000457422 SLFN12Q8IYM2 578 aa18.58■□□□□ 0.57
CCDC43-202ENST00000457422 CSRNP1Q96S65 589 aa18.58■□□□□ 0.57
CCDC43-202ENST00000457422 NOC4LQ9BVI4 516 aaKnown RBP18.58■□□□□ 0.57
CCDC43-202ENST00000457422 STK32BQ9NY57 414 aa18.58■□□□□ 0.57
CCDC43-202ENST00000457422 HERC5Q9UII4 1024 aaKnown RBP18.58■□□□□ 0.57
CCDC43-202ENST00000457422 EPN1Q9Y6I3 576 aaPredicted RBP18.58■□□□□ 0.57
CCDC43-202ENST00000457422 A0A1W2PQJ5 194 aa18.58■□□□□ 0.56
CCDC43-202ENST00000457422 NDUFA10O95299 355 aa18.58■□□□□ 0.56
CCDC43-202ENST00000457422 IDEP14735 1019 aa18.58■□□□□ 0.56
CCDC43-202ENST00000457422 ARHGAP25P42331 645 aa18.58■□□□□ 0.56
CCDC43-202ENST00000457422 IKQ13123 557 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-202ENST00000457422 SYDE2Q5VT97 1194 aa18.58■□□□□ 0.56
CCDC43-202ENST00000457422 WDR59Q6PJI9 974 aa18.58■□□□□ 0.56
CCDC43-202ENST00000457422 P2RX7Q99572 595 aaKnown RBP18.58■□□□□ 0.56
CCDC43-202ENST00000457422 CHP1Q99653 195 aa18.58■□□□□ 0.56
CCDC43-202ENST00000457422 OGFRQ9NZT2 677 aa18.58■□□□□ 0.56
CCDC43-202ENST00000457422 RASSF10A6NK89 507 aa18.57■□□□□ 0.56
CCDC43-202ENST00000457422 TBX3O15119 743 aa18.57■□□□□ 0.56
CCDC43-202ENST00000457422 BMP3P12645 472 aa18.57■□□□□ 0.56
CCDC43-202ENST00000457422 TAL1P17542 331 aaPredicted RBP18.57■□□□□ 0.56
CCDC43-202ENST00000457422 PPP2R3AQ06190 1150 aa18.57■□□□□ 0.56
CCDC43-202ENST00000457422 TUBB2AQ13885 445 aa18.57■□□□□ 0.56
CCDC43-202ENST00000457422 TSR1Q2NL82 804 aaKnown RBP18.57■□□□□ 0.56
CCDC43-202ENST00000457422 FBXO11Q86XK2 927 aa18.57■□□□□ 0.56
CCDC43-202ENST00000457422 TUBB2BQ9BVA1 445 aa18.57■□□□□ 0.56
CCDC43-202ENST00000457422 FOSP01100 380 aaPredicted RBP18.56■□□□□ 0.56
CCDC43-202ENST00000457422 TRIM21P19474 475 aaKnown RBP18.56■□□□□ 0.56
CCDC43-202ENST00000457422 ZBED6P86452 979 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 ARHGAP4P98171 946 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 EN1Q05925 392 aaPredicted RBP18.56■□□□□ 0.56
CCDC43-202ENST00000457422 USH1GQ495M9 461 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 Q4G0T1 1027 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 FKBP15Q5T1M5 1219 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 TEX2Q8IWB9 1127 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 NKRFO15226 690 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC43-202ENST00000457422 KLK7P49862 253 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 COASYQ13057 564 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 RSRC2Q7L4I2 434 aaKnown RBP18.56■□□□□ 0.56
CCDC43-202ENST00000457422 ETNPPLQ8TBG4 499 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 SLF1Q9BQI6 1058 aa18.56■□□□□ 0.56
CCDC43-202ENST00000457422 BMP2KQ9NSY1 1161 aaPredicted RBP18.56■□□□□ 0.56
CCDC43-202ENST00000457422 REXO2Q9Y3B8 237 aaKnown RBP18.56■□□□□ 0.56
CCDC43-202ENST00000457422 A0A1W2PRG0 241 aa18.55■□□□□ 0.56
CCDC43-202ENST00000457422 TCP10L2B9ZVM9 353 aa18.55■□□□□ 0.56
CCDC43-202ENST00000457422 SREBF1P36956 1147 aa18.55■□□□□ 0.56
CCDC43-202ENST00000457422 ZNF569Q5MCW4 686 aa18.55■□□□□ 0.56
CCDC43-202ENST00000457422 ZNF662Q6ZS27 426 aa18.55■□□□□ 0.56
CCDC43-202ENST00000457422 LRRC55Q6ZSA7 311 aa18.55■□□□□ 0.56
CCDC43-202ENST00000457422 CAMKK2Q96RR4 588 aa18.55■□□□□ 0.56
CCDC43-202ENST00000457422 KIF13BQ9NQT8 1826 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 SPDYE2BA6NHP3 402 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 SPDYE4A6NLX3 237 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 SPDYE6P0CI01 402 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 STAT3P40763 770 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 CDK17Q00537 523 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 SPIRE1Q08AE8 756 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 MAN2A1Q16706 1144 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 VWA3BQ502W6 1294 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 ZCWPW2Q504Y3 356 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 RSBN1LQ6PCB5 846 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-202ENST00000457422 GLIS3Q8NEA6 775 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 TSG101Q99816 390 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms