RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 HSPA9P38646 679 aaKnown RBP11.38□□□□□ -0.59
CLIP4-208ENST00000456385 MRPL12P52815 198 aaKnown RBP11.38□□□□□ -0.59
CLIP4-208ENST00000456385 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 VWA3BQ502W6 1294 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 FAM114A1Q8IWE2 563 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 KIAA0895Q8NCT3 520 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 WHAMMQ8TF30 809 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 BAP1Q92560 729 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 TRIM9Q9C026 710 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 ACTR5Q9H9F9 607 aaPredicted RBP11.38□□□□□ -0.59
CLIP4-208ENST00000456385 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 LRRC4CQ9HCJ2 640 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 SLC39A2Q9NP94 309 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 NFS1Q9Y697 457 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
CLIP4-208ENST00000456385 BICDL2A1A5D9 508 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 ECHS1P30084 290 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 CLNS1AP54105 237 aaKnown RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 ASIC1P78348 528 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 ZNF844Q08AG5 666 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 ACCSLQ4AC99 568 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 TDRD12Q587J7 1177 aaKnown RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 ODF2Q5BJF6 829 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 HGSNATQ68CP4 663 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 TNS3Q68CZ2 1445 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 DHX37Q8IY37 1157 aaKnown RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 RAPGEF5Q92565 580 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 TBC1D31Q96DN5 1066 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 SKAP2O75563 359 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 EZRP15311 586 aaKnown RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 CTNNA1P35221 906 aaKnown RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 FLT3P36888 993 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 PTPROQ16827 1216 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 PFKFB3Q16875 520 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 FAM47AQ5JRC9 791 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 TEX11Q8IYF3 940 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 BLIDQ8IZY5 108 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 C1orf131Q8NDD1 294 aaKnown RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 INPP4AQ96PE3 977 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 NEUROG2Q9H2A3 272 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-208ENST00000456385 NLRC4Q9NPP4 1024 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 PLCB1Q9NQ66 1216 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 ABCF2Q9UG63 623 aa11.37□□□□□ -0.59
CLIP4-208ENST00000456385 SLC5A1P13866 664 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 KLRC1P26715 233 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 INF2Q27J81 1249 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 TLDC1Q6P9B6 456 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 ANAPC4Q9UJX5 808 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 SRRM3A6NNA2 597 aaPredicted RBP11.36□□□□□ -0.59
CLIP4-208ENST00000456385 DYNLL1P63167 89 aaKnown RBP11.36□□□□□ -0.59
CLIP4-208ENST00000456385 SATB1Q01826 763 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 TXNRD1Q16881 649 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
CLIP4-208ENST00000456385 CACNA2D4Q7Z3S7 1137 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 DNAJC10Q8IXB1 793 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 CACNA2D3Q8IZS8 1091 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 RNF10Q8N5U6 811 aaKnown RBP11.36□□□□□ -0.59
CLIP4-208ENST00000456385 ARFGAP2Q8N6H7 521 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 USP38Q8NB14 1042 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 CARD10Q9BWT7 1032 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 PACSIN1Q9BY11 444 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 GOLPH3Q9H4A6 298 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 RNF14Q9UBS8 474 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 TSKSQ9UJT2 592 aa11.36□□□□□ -0.59
CLIP4-208ENST00000456385 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
CLIP4-208ENST00000456385 TMCO5BA8MYB1 307 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 TLR2O60603 784 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 RTN2O75298 545 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MYL1P05976 194 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 CALM1P0DP23 149 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 CALM2P0DP24 149 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 CALM3P0DP25 149 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 XRCC4Q13426 336 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 CRYMQ14894 314 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 ENOX2Q16206 610 aaKnown RBP11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MEI1Q5TIA1 1274 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 PDXDC1Q6P996 788 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MDM1Q8TC05 714 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 UBLCP1Q8WVY7 318 aaPredicted RBP11.35□□□□□ -0.59
CLIP4-208ENST00000456385 CCT6BQ92526 530 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 HVCN1Q96D96 273 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 CCSER1Q9C0I3 900 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 ISCUQ9H1K1 167 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MAGEB6P1A0A0J9YX57 407 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MGRN1O60291 552 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 DDAH1O94760 285 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MYBP10242 640 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MAGOHP61326 146 aaKnown RBP11.35□□□□□ -0.59
CLIP4-208ENST00000456385 PPP2R2AP63151 447 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 ARID5AQ03989 594 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 NAA25Q14CX7 972 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 LRCH2Q5VUJ6 765 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 NAIF1Q69YI7 327 aaPredicted RBP11.35□□□□□ -0.59
CLIP4-208ENST00000456385 CABP7Q86V35 215 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MAGEC3Q8TD91 643 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 TATDN2Q93075 761 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MAGOHBQ96A72 148 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms