RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TBX2Q13207 712 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 GPATCH4Q5T3I0 446 aaKnown RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 CCDC65Q8IXS2 484 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 POLR2FP61218 127 aaKnown RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 KRT83P78385 493 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 GPS2Q13227 327 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 PRKG1Q13976 671 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 ANO3Q9BYT9 981 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 NHEJ1Q9H9Q4 299 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 SUGCTQ9HAC7 445 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 LIMA1Q9UHB6 759 aaKnown RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 LAD1O00515 517 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 NKRFO15226 690 aaKnown RBP eCLIP13.28□□□□□ -0.288e-7■■□□□ 14.5
SMPD4-213ENST00000454468 ERLIN1O75477 346 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 SHMT1P34896 483 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 USP8P40818 1118 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-213ENST00000454468 KCTD19Q17RG1 926 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-213ENST00000454468 SPATA20Q8TB22 786 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 DHTKD1Q96HY7 919 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-213ENST00000454468 ZNF277Q9NRM2 450 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-213ENST00000454468 DDX41Q9UJV9 622 aaKnown RBP13.28□□□□□ -0.28
SMPD4-213ENST00000454468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMPD4-213ENST00000454468 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-213ENST00000454468 GCNT3O95395 438 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 EEF1GP26641 437 aaKnown RBP13.28□□□□□ -0.28
SMPD4-213ENST00000454468 GRB10Q13322 594 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 DLGAP5Q15398 846 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 CCDC70Q6NSX1 233 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 CEP112Q8N8E3 955 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 LRRC15Q8TF66 581 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 NDST4Q9H3R1 872 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 MYO6Q9UM54 1294 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
SMPD4-213ENST00000454468 TMCO5BA8MYB1 307 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 TADA3O75528 432 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 TUBB4AP04350 444 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 PLA2G4BP0C869 781 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 MAGEA1P43355 309 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 CTTNQ14247 550 aaKnown RBP13.27□□□□□ -0.28
SMPD4-213ENST00000454468 TMC4Q7Z404 712 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 GIMAP8Q8ND71 665 aaPredicted RBP13.27□□□□□ -0.28
SMPD4-213ENST00000454468 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 LSM14BQ9BX40 385 aaKnown RBP13.27□□□□□ -0.28
SMPD4-213ENST00000454468 RGL1Q9NZL6 768 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 CDC23Q9UJX2 597 aa13.27□□□□□ -0.28
SMPD4-213ENST00000454468 FANCGO15287 622 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 PRPF6O94906 941 aaKnown RBP13.27□□□□□ -0.29
SMPD4-213ENST00000454468 PNMA6AP0CW24 399 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-213ENST00000454468 ECE1P42892 770 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 RASSF7Q02833 373 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 TRIM14Q14142 442 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 APOBEC3HQ6NTF7 200 aaKnown RBP13.27□□□□□ -0.29
SMPD4-213ENST00000454468 DNAAF5Q86Y56 855 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 PROM2Q8N271 834 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 ERMNQ8TAM6 284 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 PRMT6Q96LA8 375 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-213ENST00000454468 AMNQ9BXJ7 453 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 KBTBD4Q9NVX7 518 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 TMEM51Q9NW97 253 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 DNM3Q9UQ16 869 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 ZNF185O15231 689 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 RHOBTB3O94955 611 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 LMAN1P49257 510 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 IRX3P78415 501 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-213ENST00000454468 ADAM9Q13443 819 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 SYCP3Q8IZU3 236 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 BHMT2Q9H2M3 363 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 SWAP70Q9UH65 585 aa13.27□□□□□ -0.29
SMPD4-213ENST00000454468 EIF4A3P38919 411 aaKnown RBP13.26□□□□□ -0.29
SMPD4-213ENST00000454468 CCDC51Q96ER9 411 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 CENPHQ9H3R5 247 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 MLXIPQ9HAP2 919 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 BMP3P12645 472 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 FAM83BQ5T0W9 1011 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 TTI2Q6NXR4 508 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 SRGAP1Q7Z6B7 1085 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 IRF2BP1Q8IU81 584 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 GSPT2Q8IYD1 628 aaKnown RBP13.26□□□□□ -0.29
SMPD4-213ENST00000454468 KIAA0895Q8NCT3 520 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 RAD54LQ92698 747 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 SEMA6BQ9H3T3 888 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 RABEP2Q9H5N1 569 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 L2HGDHQ9H9P8 463 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 SMARCAL1Q9NZC9 954 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 VPS18Q9P253 973 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 MRFAP1Q9Y605 127 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 MOCS3O95396 460 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 NDUFB10O96000 172 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 PODNQ7Z5L7 613 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 MYCT1Q8N699 235 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 TBC1D5Q92609 795 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 SECISBP2LQ93073 1101 aaKnown RBP13.26□□□□□ -0.29
SMPD4-213ENST00000454468 THAP9Q9H5L6 903 aa13.26□□□□□ -0.29
SMPD4-213ENST00000454468 KLRC4O43908 158 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms