RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 IBSPP21815 317 aaPredicted RBP7.08□□□□□ -1.28
CUL3-208ENST00000454323 PMLP29590 882 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 KRTAP1-1Q07627 177 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 CACNB2Q08289 660 aaPredicted RBP7.08□□□□□ -1.28
CUL3-208ENST00000454323 NOL9Q5SY16 702 aaKnown RBP7.08□□□□□ -1.28
CUL3-208ENST00000454323 PLEKHH3Q7Z736 793 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 CCDC144CPQ8IYA2 1237 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 SMARCC2Q8TAQ2 1214 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 ZCRB1Q8TBF4 217 aaKnown RBP7.08□□□□□ -1.28
CUL3-208ENST00000454323 SH3TC2Q8TF17 1288 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 DNAJC7Q99615 494 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 ACTR10Q9NZ32 417 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 ZNRF3Q9ULT6 936 aa7.08□□□□□ -1.28
CUL3-208ENST00000454323 MEIS3P2A8K0S8 358 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 MC3RP41968 323 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 CLCQ05315 142 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 RASGRF1Q13972 1273 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 FILIP1Q7Z7B0 1213 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 TMEM192Q8IY95 271 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 SH3RF3Q8TEJ3 882 aaPredicted RBP7.07□□□□□ -1.28
CUL3-208ENST00000454323 ZBTB8AQ96BR9 441 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 FERD3LQ96RJ6 166 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 SUCOQ9UBS9 1254 aaKnown RBP7.07□□□□□ -1.28
CUL3-208ENST00000454323 PRKAB1Q9Y478 270 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 COL4A3BPQ9Y5P4 624 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 HCFC2Q9Y5Z7 792 aa7.07□□□□□ -1.28
CUL3-208ENST00000454323 CCDC85CA6NKD9 419 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 PDPK1O15530 556 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 GLI4P10075 376 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 CYP2C8P10632 490 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 IMPDH2P12268 514 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 TACR1P25103 407 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 MCM4P33991 863 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 ACVRL1P37023 503 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 CASP7P55210 303 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 POU4F1Q01851 419 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 RGL3Q3MIN7 710 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 CRIP3Q6Q6R5 217 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 PTCHD1Q96NR3 888 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 SCAND2PQ9GZW5 306 aaPredicted RBP7.06□□□□□ -1.28
CUL3-208ENST00000454323 TMX1Q9H3N1 280 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 ST7Q9NRC1 585 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 FANCLQ9NW38 375 aa7.06□□□□□ -1.28
CUL3-208ENST00000454323 DNAJC6O75061 913 aa7.05□□□□□ -1.28
CUL3-208ENST00000454323 CDC45O75419 566 aa7.05□□□□□ -1.28
CUL3-208ENST00000454323 KIAA0907Q7Z7F0 614 aaPredicted RBP7.05□□□□□ -1.28
CUL3-208ENST00000454323 JMYQ8N9B5 988 aa7.05□□□□□ -1.28
CUL3-208ENST00000454323 APPBP2Q92624 585 aa7.05□□□□□ -1.28
CUL3-208ENST00000454323 SPC25Q9HBM1 224 aa7.05□□□□□ -1.28
CUL3-208ENST00000454323 PCDH12Q9NPG4 1184 aa7.05□□□□□ -1.28
CUL3-208ENST00000454323 TMEM260Q9NX78 707 aa7.05□□□□□ -1.28
CUL3-208ENST00000454323 ESYT3A0FGR9 886 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 MROH6A6NGR9 719 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 MARCH6O60337 910 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 RPL13P26373 211 aaKnown RBP7.04□□□□□ -1.28
CUL3-208ENST00000454323 ANAPC15P60006 121 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 IFRD2Q12894 506 aaPredicted RBP7.04□□□□□ -1.28
CUL3-208ENST00000454323 FXNQ16595 210 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 ANKRD39Q53RE8 183 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 FBXW10Q5XX13 1052 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 INTS3Q68E01 1043 aaKnown RBP7.04□□□□□ -1.28
CUL3-208ENST00000454323 GK5Q6ZS86 529 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 HOMER1Q86YM7 354 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 LINC00482Q8N8I6 264 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 MICAL1Q8TDZ2 1067 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 SPATA6Q9NWH7 488 aaPredicted RBP7.04□□□□□ -1.28
CUL3-208ENST00000454323 FHOD1Q9Y613 1164 aa7.04□□□□□ -1.28
CUL3-208ENST00000454323 H0Y8X5 98 aa7.03□□□□□ -1.28
CUL3-208ENST00000454323 SQSTM1Q13501 440 aa7.03□□□□□ -1.28
CUL3-208ENST00000454323 LZTR1Q8N653 840 aa7.03□□□□□ -1.28
CUL3-208ENST00000454323 VPS11Q9H270 941 aa7.03□□□□□ -1.28
CUL3-208ENST00000454323 METTL14Q9HCE5 456 aaKnown RBP7.03□□□□□ -1.28
CUL3-208ENST00000454323 INVSQ9Y283 1065 aa7.03□□□□□ -1.28
CUL3-208ENST00000454323 PPP1R12AO14974 1030 aaPredicted RBP7.02□□□□□ -1.29
CUL3-208ENST00000454323 SLPIP03973 132 aa7.02□□□□□ -1.29
CUL3-208ENST00000454323 EEF1DP3Q658K8 133 aa7.02□□□□□ -1.29
CUL3-208ENST00000454323 TTLL6Q8N841 843 aa7.02□□□□□ -1.29
CUL3-208ENST00000454323 C19orf47Q8N9M1 422 aaKnown RBP7.02□□□□□ -1.29
CUL3-208ENST00000454323 CHMP4AQ9BY43 222 aa7.02□□□□□ -1.29
CUL3-208ENST00000454323 SLKQ9H2G2 1235 aaPredicted RBP7.02□□□□□ -1.29
CUL3-208ENST00000454323 SEMA4AQ9H3S1 761 aa7.02□□□□□ -1.29
CUL3-208ENST00000454323 PLA2G2DQ9UNK4 145 aa7.02□□□□□ -1.29
CUL3-208ENST00000454323 GJB6O95452 261 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 ITGA4P13612 1032 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 PMS1P54277 932 aaKnown RBP7.01□□□□□ -1.29
CUL3-208ENST00000454323 GYS2P54840 703 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 C2orf27AQ580R0 203 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 CRB2Q5IJ48 1285 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 RCSD1Q6JBY9 416 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 ZFPM1Q8IX07 1006 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 RPUSD2Q8IZ73 545 aaKnown RBP7.01□□□□□ -1.29
CUL3-208ENST00000454323 NOX5Q96PH1 765 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 CCDC180Q9P1Z9 1646 aa7.01□□□□□ -1.29
CUL3-208ENST00000454323 TRBV23OR9-2A0A075B6M9 112 aa7□□□□□ -1.29
CUL3-208ENST00000454323 C9orf118A6NHY6 69 aa7□□□□□ -1.29
CUL3-208ENST00000454323 LAMTOR5O43504 91 aa7□□□□□ -1.29
CUL3-208ENST00000454323 THBS2P35442 1172 aa7□□□□□ -1.29
CUL3-208ENST00000454323 LARP1BQ659C4 914 aaKnown RBP7□□□□□ -1.29
CUL3-208ENST00000454323 C16orf86Q6ZW13 317 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms