RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DNM2P50570 870 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 RAB27AP51159 221 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 GUCY2FP51841 1108 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ARHGAP4P98171 946 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 SCRN3Q0VDG4 424 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 RCN2Q14257 317 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MYBPC2Q14324 1141 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 SLC9C1Q4G0N8 1177 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CMPK2Q5EBM0 449 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CYB5RLQ6IPT4 315 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 RSRC2Q7L4I2 434 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 ELOA2Q8IYF1 753 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 SLC35F6Q8N357 371 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 GALNT15Q8N3T1 639 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MRPL50Q8N5N7 158 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 TRIML2Q8N7C3 387 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 EIF1ADQ8N9N8 165 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 SCAIQ8N9R8 606 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 NEK9Q8TD19 979 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 BRF1Q92994 677 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CAVIN3Q969G5 261 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 AIDAQ96BJ3 306 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CALML4Q96GE6 196 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 DHTKD1Q96HY7 919 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 ABHD8Q96I13 439 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 SEC16BQ96JE7 1060 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 NUDCD1Q96RS6 583 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CCT8L2Q96SF2 557 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 OSBPL3Q9H4L5 887 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 FAM53CQ9NYF3 392 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 STOML2Q9UJZ1 356 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.39□□□□□ -2.03
USP53-202ENST00000450251 ANGPTL3Q9Y5C1 460 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 BZW2Q9Y6E2 419 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 CLTCL1P53675 1640 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CD109Q6YHK3 1445 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 EVPLLA8MZ36 301 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 FAM25AB3EWG3 89 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 FAM25CB3EWG5 89 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 FAM25GB3EWG6 89 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MAP2K7O14733 419 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 IFIT3O14879 490 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 TSPAN9O75954 239 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 BAG3O95817 575 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MYBL2P10244 700 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 EEF1GP26641 437 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 PPARGP37231 505 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 SCTRP47872 440 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 VPS41P49754 854 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ST13P50502 369 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 ADKP55263 362 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 ADARP55265 1226 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 DEFA1P59665 94 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 DEFA3P59666 94 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 COPS2P61201 443 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 EIF2B5Q13144 721 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 CBX3Q13185 183 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MED21Q13503 144 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 KRT81Q14533 505 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CCDC14Q49A88 953 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 PDCD4Q53EL6 469 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 RILPL1Q5EBL4 403 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 SOGA3Q5TF21 947 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MFSD4BQ5TF39 518 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ANO1Q5XXA6 986 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 POTEAQ6S8J7 498 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 KIF6Q6ZMV9 814 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 PRR23BQ6ZRT6 265 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 BTN2A1Q7KYR7 527 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MCM10Q7L590 875 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 TMTC2Q8N394 836 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MMGT1Q8N4V1 131 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 RBBP8NLQ8NC74 664 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 FERMT2Q96AC1 680 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ANKRD36BP1Q96IX9 119 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 GSDMAQ96QA5 445 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 IFIH1Q9BYX4 1025 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 ALDH8A1Q9H2A2 487 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 RNF41Q9H4P4 317 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 RPAP3Q9H6T3 665 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 C19orf44Q9H6X5 657 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 METTL14Q9HCE5 456 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 KRT82Q9NSB4 513 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 STK17AQ9UEE5 414 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 LCMT1Q9UIC8 334 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ARHGAP26Q9UNA1 814 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MTMR6Q9Y217 621 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ATP11BQ9Y2G3 1177 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MYO5CQ9NQX4 1742 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 RFX7Q2KHR2 1363 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 DISP3Q9P2K9 1392 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ZNF521Q96K83 1311 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 MYO1FO00160 1098 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 SHOX2O60902 331 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 ZC3H11AO75152 810 aaKnown RBP eCLIP2.39□□□□□ -2.03
USP53-202ENST00000450251 KRT14P02533 472 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 PDHA1P08559 390 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 SCG2P13521 617 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 SERPINB1P30740 379 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms