RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ATF7P17544 494 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 LONRF3Q496Y0 759 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 C3orf67Q6ZVT6 689 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 TPH2Q8IWU9 490 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 L3MBTL3Q96JM7 780 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 FAM227BQ96M60 508 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 IFIH1Q9BYX4 1025 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 WDR11Q9BZH6 1224 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 DYRK4Q9NR20 520 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 FARP1Q9Y4F1 1045 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 SLC15A5A6NIM6 579 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 hCG_1984214I3L0E3 225 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 DPYDQ12882 1025 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 PRPF38BQ5VTL8 546 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 IRAK1BP1Q5VVH5 260 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZNF713Q8N859 430 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 KIF12Q96FN5 646 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 TPCN1Q9ULQ1 816 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 TNNQ9UQP3 1299 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 NUCB1Q02818 461 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 CABP7Q86V35 215 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 THEM5Q8N1Q8 247 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 FIBCD1Q8N539 461 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 CLMNQ96JQ2 1002 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 STAP2Q9UGK3 403 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 RLBP1P12271 317 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 CPB1P15086 417 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 MCM7P33993 719 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 CACNB1Q02641 598 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 RABL6Q3YEC7 729 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 NLRP4Q96MN2 994 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZNF577Q9BSK1 485 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 EMILIN2Q9BXX0 1053 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 TRPC7Q9HCX4 862 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 HPS5Q9UPZ3 1129 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 DNM3Q9UQ16 869 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 CYP2D6P10635 497 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 ADCYAP1R1P41586 468 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 TXKP42681 527 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 ERVK-9P63128 1117 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 ERVK-24P63145 666 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 PDIA6Q15084 440 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 FAM110CQ1W6H9 321 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 NEDD1Q8NHV4 660 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 NSMCE1Q8WV22 266 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 SPATC1LQ9H0A9 340 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 CCNT1O60563 726 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 CETN2P41208 172 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 BAATQ14032 418 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 DGKDQ16760 1214 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 COL13A1Q5TAT6 717 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 TXNRD3Q86VQ6 643 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 P2RX7Q99572 595 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 LUC7LQ9NQ29 371 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 CASP8AP2Q9UKL3 1982 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 NDUFB10O96000 172 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 ARL4DP49703 201 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 CCDC40Q4G0X9 1142 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 ABHD16BQ9H3Z7 469 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 KCNQ5Q9NR82 932 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 MRPS17Q9Y2R5 130 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 KLRK1P26718 216 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 UBXN2BQ14CS0 331 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZMYM1Q5SVZ6 1142 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 IFNL1Q8IU54 200 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 PIK3R5Q8WYR1 880 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 CEP95Q96GE4 821 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 IWS1Q96ST2 819 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 MMS19Q96T76 1030 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 MYL10Q9BUA6 226 aa6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 URB1O60287 2271 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-209ENST00000448940 OPLAHO14841 1288 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 STAT6P42226 847 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 TAF1BQ53T94 588 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 LRCH2Q5VUJ6 765 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 DDX53Q86TM3 631 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 IPPQ9Y573 584 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 GGPS1O95749 300 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 SFSWAPQ12872 951 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 MTX1Q13505 466 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 LAMC2Q13753 1193 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 MRIQ9BWK5 157 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 SRRDQ9UH36 339 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 ABCC6O95255 1503 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PTPRAP18433 802 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 RECQLP46063 649 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PPFIA1Q13136 1202 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 GLB1LQ6UWU2 654 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 SAPCD2Q86UD0 394 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 SLFN12Q8IYM2 578 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 FANCBQ8NB91 859 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 STRBPQ96SI9 672 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 EXOC1Q9NV70 894 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 LRWD1Q9UFC0 647 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PPLO60437 1756 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 TLR2O60603 784 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 URODP06132 367 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 CDC42EP1Q00587 391 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 CCDC173Q0VFZ6 552 aa6.25□□□□□ -1.41
CDC42BPA-209ENST00000448940 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms