RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 FCHSD1Q86WN1 690 aa19.86■□□□□ 0.77
LMNA-208ENST00000448611 SCYL3Q8IZE3 742 aa19.86■□□□□ 0.77
LMNA-208ENST00000448611 PRPF38AQ8NAV1 312 aaKnown RBP19.86■□□□□ 0.77
LMNA-208ENST00000448611 HOOK2Q96ED9 719 aa19.86■□□□□ 0.77
LMNA-208ENST00000448611 UIMC1Q96RL1 719 aa19.86■□□□□ 0.77
LMNA-208ENST00000448611 SLF1Q9BQI6 1058 aa19.86■□□□□ 0.77
LMNA-208ENST00000448611 MYMKA6NI61 221 aa19.85■□□□□ 0.77
LMNA-208ENST00000448611 SLC26A4O43511 780 aa19.85■□□□□ 0.77
LMNA-208ENST00000448611 ICAM1P05362 532 aa19.85■□□□□ 0.77
LMNA-208ENST00000448611 MTMR2Q13614 643 aa19.85■□□□□ 0.77
LMNA-208ENST00000448611 DHX8Q14562 1220 aaKnown RBP19.85■□□□□ 0.77
LMNA-208ENST00000448611 PRAMEF18Q5VWM3 479 aa19.85■□□□□ 0.77
LMNA-208ENST00000448611 GGA3Q9NZ52 723 aa19.85■□□□□ 0.77
LMNA-208ENST00000448611 MAPK8IP1Q9UQF2 711 aa19.85■□□□□ 0.77
LMNA-208ENST00000448611 A0A1B0GTH6 734 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 COBLO75128 1261 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 CCZ1BP86790 482 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 CCZ1P86791 482 aaPredicted RBP19.84■□□□□ 0.77
LMNA-208ENST00000448611 ARMCX5Q6P1M9 558 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.84■□□□□ 0.77
LMNA-208ENST00000448611 AGBL1Q96MI9 1066 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 FAM20AQ96MK3 541 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 WDR18Q9BV38 432 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 EMILIN3Q9NT22 766 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 KDM3AQ9Y4C1 1321 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 IGLV3-22A0A075B6J6 115 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 MSH4O15457 936 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 VCAM1P19320 739 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 CCT6AP40227 531 aaKnown RBP19.84■□□□□ 0.77
LMNA-208ENST00000448611 PDE4DQ08499 809 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 CNNM4Q6P4Q7 775 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 CCDC150Q8NCX0 1101 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 ZKSCAN4Q969J2 545 aaPredicted RBP19.84■□□□□ 0.77
LMNA-208ENST00000448611 CCDC47Q96A33 483 aaKnown RBP19.84■□□□□ 0.77
LMNA-208ENST00000448611 NT5C3AQ9H0P0 336 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 EXOC1Q9NV70 894 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 PPP2R3BQ9Y5P8 575 aa19.84■□□□□ 0.77
LMNA-208ENST00000448611 ZC3H4Q9UPT8 1303 aaKnown RBP19.83■□□□□ 0.77
LMNA-208ENST00000448611 STAT3P40763 770 aa19.83■□□□□ 0.77
LMNA-208ENST00000448611 NR1I3Q14994 352 aa19.83■□□□□ 0.77
LMNA-208ENST00000448611 CYP2W1Q8TAV3 490 aa19.83■□□□□ 0.77
LMNA-208ENST00000448611 WRNIP1Q96S55 665 aa19.83■□□□□ 0.77
LMNA-208ENST00000448611 GTPBP4Q9BZE4 634 aaKnown RBP19.83■□□□□ 0.77
LMNA-208ENST00000448611 CCPG1Q9ULG6 757 aa19.83■□□□□ 0.77
LMNA-208ENST00000448611 PVALEFA0A1B0GWK0 134 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 SKILP12757 684 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 PTPRAP18433 802 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 USP14P54578 494 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 SPP2Q13103 211 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 LRRC27Q9C0I9 530 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 SLC38A10Q9HBR0 1119 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 SSC5DA1L4H1 1573 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 HSD17B4P51659 736 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 PMS1P54277 932 aaKnown RBP19.82■□□□□ 0.76
LMNA-208ENST00000448611 STK4Q13043 487 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 STIM1Q13586 685 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 TPD52L1Q16890 204 aaPredicted RBP19.82■□□□□ 0.76
LMNA-208ENST00000448611 COBLL1Q53SF7 1204 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 UNC13DQ70J99 1090 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 TANGO6Q9C0B7 1094 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 PPP1R9AQ9ULJ8 1098 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 FZD1Q9UP38 647 aa19.82■□□□□ 0.76
LMNA-208ENST00000448611 PSMA7O14818 248 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 FCER1AP12319 257 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 SFPQP23246 707 aaKnown RBP eCLIP19.81■□□□□ 0.76
LMNA-208ENST00000448611 ZNF76P36508 570 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 BACE1P56817 501 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 PTPN21Q16825 1174 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 CLEC4DQ8WXI8 215 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 DHTKD1Q96HY7 919 aaPredicted RBP19.81■□□□□ 0.76
LMNA-208ENST00000448611 CTAGE1Q96RT6 745 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 RPAP3Q9H6T3 665 aaPredicted RBP19.81■□□□□ 0.76
LMNA-208ENST00000448611 AS3MTQ9HBK9 375 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 ADD3Q9UEY8 706 aaKnown RBP19.81■□□□□ 0.76
LMNA-208ENST00000448611 VAV3Q9UKW4 847 aa19.81■□□□□ 0.76
LMNA-208ENST00000448611 TRIM49BA6NDI0 452 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 GLTPD2A6NH11 291 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 LRRC10BA6NIK2 292 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 MED24O75448 989 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 FLOT1O75955 427 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 GHRHRQ02643 423 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 TBX2Q13207 712 aaPredicted RBP19.8■□□□□ 0.76
LMNA-208ENST00000448611 HAUS3Q68CZ6 603 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 ZNF280CQ8ND82 737 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 DDX12PQ92771 950 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 KLRG1Q96E93 195 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 EHMT1Q9H9B1 1298 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 PICK1Q9NRD5 415 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 LIMA1Q9UHB6 759 aaKnown RBP19.8■□□□□ 0.76
LMNA-208ENST00000448611 KIAA1024Q9UPX6 916 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 POTEB3A0JP26 581 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 POTECB2RU33 542 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 PPP1R2P41236 205 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 SPAG1Q07617 926 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 POTEBQ6S5H4 581 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 KIAA0895Q8NCT3 520 aa19.8■□□□□ 0.76
LMNA-208ENST00000448611 E9PMD0 336 aa19.79■□□□□ 0.76
LMNA-208ENST00000448611 EHHADHQ08426 723 aa19.79■□□□□ 0.76
LMNA-208ENST00000448611 SPECC1LQ69YQ0 1117 aa19.79■□□□□ 0.76
LMNA-208ENST00000448611 NCAPH2Q6IBW4 605 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms