RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CEP55Q53EZ4 464 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 KRI1Q8N9T8 703 aaKnown RBP22.14■■□□□ 1.13
SGCE-207ENST00000447873 MBOAT7Q96N66 472 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 IWS1Q96ST2 819 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 TMEM60Q9H2L4 133 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 PCDHA7Q9UN72 937 aa22.14■■□□□ 1.13
SGCE-207ENST00000447873 MORC2Q9Y6X9 1032 aaPredicted RBP22.14■■□□□ 1.13
SGCE-207ENST00000447873 PLXNA1Q9UIW2 1896 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 SOWAHBA6NEL2 793 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 B4DLN1 442 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 ECM2O94769 699 aaPredicted RBP22.13■■□□□ 1.13
SGCE-207ENST00000447873 OR52Z1P0C646 297 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 PTMSP20962 102 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 ALDH5A1P51649 535 aaPredicted RBP22.13■■□□□ 1.13
SGCE-207ENST00000447873 GRB14Q14449 540 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 ARL6IP4Q66PJ3 421 aaKnown RBP22.13■■□□□ 1.13
SGCE-207ENST00000447873 VSIG10LQ86VR7 867 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 CYP2W1Q8TAV3 490 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 ZFP91Q96JP5 570 aaPredicted RBP22.13■■□□□ 1.13
SGCE-207ENST00000447873 MPHOSPH6Q99547 160 aaKnown RBP22.13■■□□□ 1.13
SGCE-207ENST00000447873 CFHR5Q9BXR6 569 aa22.13■■□□□ 1.13
SGCE-207ENST00000447873 SLC15A5A6NIM6 579 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 MARCH6O60337 910 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 MRPS9P82933 396 aaKnown RBP22.12■■□□□ 1.13
SGCE-207ENST00000447873 FERMT2Q96AC1 680 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 SRPRBQ9Y5M8 271 aaKnown RBP22.12■■□□□ 1.13
SGCE-207ENST00000447873 MGAMO43451 1857 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 ASTN1O14525 1302 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 IGLV3-22A0A075B6J6 115 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 GADD45BO75293 160 aaPredicted RBP22.12■■□□□ 1.13
SGCE-207ENST00000447873 UBE2HP62256 183 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 DPP9Q86TI2 863 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 PLA2G4DQ86XP0 818 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 LENG9Q96B70 501 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 MXRA8Q9BRK3 442 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 FBXO2Q9UK22 296 aaPredicted RBP22.12■■□□□ 1.13
SGCE-207ENST00000447873 DOCK3Q8IZD9 2030 aa22.12■■□□□ 1.13
SGCE-207ENST00000447873 MEIS1O00470 390 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 CUTAO60888 179 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 PRPHP41219 470 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 SETQ01105 290 aaPredicted RBP22.11■■□□□ 1.13
SGCE-207ENST00000447873 STXBP2Q15833 593 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 ADALQ6DHV7 355 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 DTHD1Q6ZMT9 781 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 CLIC6Q96NY7 704 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 MTMR9Q96QG7 549 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 UBIAD1Q9Y5Z9 338 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 ZNF236Q9UL36 1845 aa22.11■■□□□ 1.13
SGCE-207ENST00000447873 VWA3AA6NCI4 1184 aa22.1■■□□□ 1.13
SGCE-207ENST00000447873 TNPO2O14787 897 aaKnown RBP22.1■■□□□ 1.13
SGCE-207ENST00000447873 COBLO75128 1261 aa22.1■■□□□ 1.13
SGCE-207ENST00000447873 STAM2O75886 525 aa22.1■■□□□ 1.13
SGCE-207ENST00000447873 ITGB5P18084 799 aa22.1■■□□□ 1.13
SGCE-207ENST00000447873 NIPA1Q7RTP0 329 aa22.1■■□□□ 1.13
SGCE-207ENST00000447873 SLC5A4Q9NY91 659 aa22.1■■□□□ 1.13
SGCE-207ENST00000447873 LOC102724159A0A0B4J2E5 919 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 TBX3O15119 743 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 TXKP42681 527 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 FCGRTP55899 365 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 PDE4DQ08499 809 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 PWP2Q15269 919 aaKnown RBP22.09■■□□□ 1.13
SGCE-207ENST00000447873 ZNF792Q3KQV3 632 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 AXDND1Q5T1B0 1012 aaPredicted RBP22.09■■□□□ 1.13
SGCE-207ENST00000447873 SLFN12Q8IYM2 578 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 FGD4Q96M96 766 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 KCNMB3Q9NPA1 279 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 JADE2Q9NQC1 790 aa22.09■■□□□ 1.13
SGCE-207ENST00000447873 MSH4O15457 936 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 EIF3JO75822 258 aaKnown RBP22.08■■□□□ 1.13
SGCE-207ENST00000447873 EDNRBP24530 442 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 LACTBP83111 547 aaPredicted RBP22.08■■□□□ 1.13
SGCE-207ENST00000447873 SP3Q02447 781 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 GRIN1Q05586 938 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 MTMR1Q13613 665 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 MORN1Q5T089 497 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 NLRX1Q86UT6 975 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 ETNPPLQ8TBG4 499 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 HAS1Q92839 578 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 WDR11Q9BZH6 1224 aa22.08■■□□□ 1.13
SGCE-207ENST00000447873 DDX49Q9Y6V7 483 aaKnown RBP22.08■■□□□ 1.13
SGCE-207ENST00000447873 A0A1W2PQ27 194 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 A0A1W2PQ64 194 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 A0A1W2PQD8 194 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 ASB14A6NK59 587 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 ARP10275 920 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 PSMC4P43686 418 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 MAP2K5Q13163 448 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 KIF22Q14807 665 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 IL17AQ16552 155 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 TMEM266Q2M3C6 531 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 ZNF579Q8NAF0 562 aaKnown RBP22.08■■□□□ 1.12
SGCE-207ENST00000447873 FAM20AQ96MK3 541 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 UIMC1Q96RL1 719 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 NUDT12Q9BQG2 462 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 CSRNP2Q9H175 543 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 TTC12Q9H892 705 aaPredicted RBP22.08■■□□□ 1.12
SGCE-207ENST00000447873 KCNH7Q9NS40 1196 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 SAGE1Q9NXZ1 904 aa22.08■■□□□ 1.12
SGCE-207ENST00000447873 DIS3Q9Y2L1 958 aaKnown RBP22.08■■□□□ 1.12
SGCE-207ENST00000447873 KIAA1217Q5T5P2 1943 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms