RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 FAM160A2Q8N612 972 aaPredicted RBP8.48□□□□□ -1.05
TRIM4-204ENST00000447480 PDILTQ8N807 584 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 P3H4Q92791 437 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 FERMT2Q96AC1 680 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 TCEANC2Q96MN5 208 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 CRACR2AQ9BSW2 395 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 NUP58Q9BVL2 599 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRIM4-204ENST00000447480 PRKD2Q9BZL6 878 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 ADD3Q9UEY8 706 aaKnown RBP8.48□□□□□ -1.05
TRIM4-204ENST00000447480 LIMA1Q9UHB6 759 aaKnown RBP8.48□□□□□ -1.05
TRIM4-204ENST00000447480 ANGEL1Q9UNK9 670 aaKnown RBP8.48□□□□□ -1.05
TRIM4-204ENST00000447480 FAN1Q9Y2M0 1017 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 SRPRBQ9Y5M8 271 aaKnown RBP8.48□□□□□ -1.05
TRIM4-204ENST00000447480 COL2A1P02458 1487 aaPredicted RBP8.48□□□□□ -1.05
TRIM4-204ENST00000447480 ZNF532Q9HCE3 1301 aa8.48□□□□□ -1.05
TRIM4-204ENST00000447480 MYO5AQ9Y4I1 1855 aaKnown RBP8.47□□□□□ -1.05
TRIM4-204ENST00000447480 A0A1W2PQC6 194 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 UNCXA6NJT0 531 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 F8W031 263 aaPredicted RBP8.47□□□□□ -1.05
TRIM4-204ENST00000447480 ZNF213O14771 459 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 FANCGO15287 622 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 PRC1O43663 620 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 MYL1P05976 194 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 BTDP43251 543 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 SCNN1DP51172 638 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 CCT2P78371 535 aaKnown RBP8.47□□□□□ -1.05
TRIM4-204ENST00000447480 AMPD2Q01433 879 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 SCARF1Q14162 830 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 ZNF569Q5MCW4 686 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 DCAF15Q66K64 600 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 METTL16Q86W50 562 aaKnown RBP8.47□□□□□ -1.05
TRIM4-204ENST00000447480 TEX11Q8IYF3 940 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 CCDC170Q8IYT3 715 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 IGSF22Q8N9C0 903 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 FAM76AQ8TAV0 307 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 NOC3LQ8WTT2 800 aaKnown RBP8.47□□□□□ -1.05
TRIM4-204ENST00000447480 IDI2Q9BXS1 227 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 TSGA10Q9BZW7 698 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 PRDM9Q9NQV7 894 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 INTS13Q9NVM9 706 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 DONSONQ9NYP3 566 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 ARPP21Q9UBL0 812 aaPredicted RBP8.47□□□□□ -1.05
TRIM4-204ENST00000447480 LCMT1Q9UIC8 334 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 MAN1B1Q9UKM7 699 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 TAF6LQ9Y6J9 622 aa8.47□□□□□ -1.05
TRIM4-204ENST00000447480 MYH1P12882 1939 aa8.46□□□□□ -1.05
TRIM4-204ENST00000447480 COL4A5P29400 1685 aa8.46□□□□□ -1.05
TRIM4-204ENST00000447480 KLF18A0A0U1RQI7 1052 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 BIN1O00499 593 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 POLR3DP05423 398 aaPredicted RBP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 CCDC172P0C7W6 258 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 NDUFV2P19404 249 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 ERCC3P19447 782 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 LONRF3Q496Y0 759 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 KRT40Q6A162 431 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 EMBQ6PCB8 327 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 CCNI2Q6ZMN8 369 aaPredicted RBP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 TOGARAM2Q6ZUX3 1019 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 TRAPPC11Q7Z392 1133 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 FOXP4Q8IVH2 680 aaPredicted RBP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 FAM177A1Q8N128 213 aaPredicted RBP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 MMGT1Q8N4V1 131 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 SMC1BQ8NDV3 1235 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 ALG1Q9BT22 464 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 RNF41Q9H4P4 317 aaPredicted RBP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 TAF1DQ9H5J8 278 aaPredicted RBP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 CNNM2Q9H8M5 875 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 FAM204AQ9H8W3 233 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 PIH1D3Q9NQM4 214 aaKnown RBP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 GINM1Q9NU53 330 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 USP40Q9NVE5 1235 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 AATFQ9NY61 560 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 FAM184BQ9ULE4 1060 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 DAGLAQ9Y4D2 1042 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 SAR1BQ9Y6B6 198 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.46□□□□□ -1.06
TRIM4-204ENST00000447480 NAV1Q8NEY1 1877 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 MYH8P13535 1937 aa8.46□□□□□ -1.06
TRIM4-204ENST00000447480 LAMB1P07942 1786 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 MOXD2PA6NHM9 499 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 WTIPA6NIX2 430 aaPredicted RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 GOLGA8BA8MQT2 603 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 PATL2C9JE40 543 aaKnown RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 WNT10BO00744 389 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 SH2B2O14492 632 aaPredicted RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 GPAA1O43292 621 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 KRT86O43790 486 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 PPP1R12BO60237 982 aaPredicted RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 FSBPO95073 299 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 SYF2O95926 243 aaKnown RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 APPP05067 770 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 FDX1P10109 184 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 IFNAR1P17181 557 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 XBP1P17861 261 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 MAP2K2P36507 400 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 TDO2P48775 406 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 IRAK1P51617 712 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 VSNL1P62760 191 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms