RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 ADD3Q9UEY8 706 aaKnown RBP21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 MCM6Q14566 821 aa21.12■□□□□ 0.97
SEMA3D-202ENST00000444867 GLIS2Q9BZE0 524 aaPredicted RBP21.12■□□□□ 0.97
SEMA3D-202ENST00000444867 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.12■□□□□ 0.97
SEMA3D-202ENST00000444867 BICDL2A1A5D9 508 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 CCT6AP40227 531 aaKnown RBP21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 PRR16Q569H4 304 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 HAUS3Q68CZ6 603 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 CCDC174Q6PII3 467 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 NUDT12Q9BQG2 462 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 ZNF541Q9H0D2 1346 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 MYMKA6NI61 221 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 ERMNQ8TAM6 284 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 LENG9Q96B70 501 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 THAP9Q9H5L6 903 aa21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 R3HCC1Q9Y3T6 440 aaKnown RBP21.11■□□□□ 0.97
SEMA3D-202ENST00000444867 RBBP6Q7Z6E9 1792 aaKnown RBP21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 CCNE1P24864 410 aa21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 HOXA13P31271 388 aaPredicted RBP21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 PSMD2Q13200 908 aa21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 TCP11X2Q5H9J9 407 aa21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 LDHDQ86WU2 507 aa21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 PRPF38AQ8NAV1 312 aaKnown RBP21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 SLF1Q9BQI6 1058 aa21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 PNMA2Q9UL42 364 aa21.1■□□□□ 0.97
SEMA3D-202ENST00000444867 CFBP00751 764 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 ICAM1P05362 532 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 EEF1GP26641 437 aaKnown RBP21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 ZNF76P36508 570 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 PBX1P40424 430 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 KRT31Q15323 416 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 KCTD17Q8N5Z5 321 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 PRIMPOLQ96LW4 560 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 TMX1Q9H3N1 280 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 BMP2KQ9NSY1 1161 aaPredicted RBP21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 ZNF112Q9UJU3 913 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 MAPK8IP1Q9UQF2 711 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 RABGAP1Q9Y3P9 1069 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 ASTN2O75129 1339 aaPredicted RBP21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 ITIH6Q6UXX5 1313 aa21.09■□□□□ 0.97
SEMA3D-202ENST00000444867 KCNJ18B7U540 433 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 FAM86B1E9PN63 330 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 FAM86B2P0C5J1 330 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 TAL1P17542 331 aaPredicted RBP21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 INPP5BP32019 993 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 USP14P54578 494 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 SPIRE1Q08AE8 756 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 KCNJ12Q14500 433 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 TTI2Q6NXR4 508 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 CCDC84Q86UT8 332 aaPredicted RBP21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 P2RX5Q93086 422 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 FBXO28Q9NVF7 368 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 PPP2R3BQ9Y5P8 575 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 SBF1O95248 1867 aa21.08■□□□□ 0.97
SEMA3D-202ENST00000444867 COPB1P53618 953 aaKnown RBP21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 STK4Q13043 487 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 ECM1Q16610 540 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 NBPF12Q5TAG4 269 aaPredicted RBP21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 KCNK18Q7Z418 384 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 FCHSD1Q86WN1 690 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 GJA10Q969M2 543 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 TRIM47Q96LD4 638 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 WDR18Q9BV38 432 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 AS3MTQ9HBK9 375 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 SCAF8Q9UPN6 1271 aaKnown RBP21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 PARP14Q460N5 1801 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 MSH4O15457 936 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 CCP110O43303 1012 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 TPM2P07951 284 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 FDX1P10109 184 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 LMNB1P20700 586 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 GHRHRQ02643 423 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 FOXR2Q6PJQ5 311 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 FAM114A1Q8IWE2 563 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 SCYL3Q8IZE3 742 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 GPC2Q8N158 579 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 CCAR2Q8N163 923 aaKnown RBP21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 SAMD3Q8N6K7 520 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 DDX12PQ92771 950 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 GPRC5DQ9NZD1 345 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 KIAA1024Q9UPX6 916 aa21.07■□□□□ 0.96
SEMA3D-202ENST00000444867 IGLV3-22A0A075B6J6 115 aa21.06■□□□□ 0.96
SEMA3D-202ENST00000444867 TEX33O43247 280 aa21.06■□□□□ 0.96
SEMA3D-202ENST00000444867 RPA1P27694 616 aa21.06■□□□□ 0.96
SEMA3D-202ENST00000444867 EHHADHQ08426 723 aa21.06■□□□□ 0.96
SEMA3D-202ENST00000444867 GUF1Q8N442 669 aaKnown RBP21.06■□□□□ 0.96
SEMA3D-202ENST00000444867 MAP3K20Q9NYL2 800 aaKnown RBP21.06■□□□□ 0.96
SEMA3D-202ENST00000444867 MAGEC2Q9UBF1 373 aaPredicted RBP21.06■□□□□ 0.96
SEMA3D-202ENST00000444867 CCPG1Q9ULG6 757 aa21.06■□□□□ 0.96
SEMA3D-202ENST00000444867 TRIM49BA6NDI0 452 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 N4BP3O15049 544 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 FCER1AP12319 257 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 HSD17B4P51659 736 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 PMS1P54277 932 aaKnown RBP21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 MCF2L2Q86YR7 1114 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 KIAA0895Q8NCT3 520 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 VAV3Q9UKW4 847 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 UTRNP46939 3433 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 ZNF536O15090 1300 aa21.05■□□□□ 0.96
SEMA3D-202ENST00000444867 POTEB3A0JP26 581 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms