RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SWAP70Q9UH65 585 aa17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 RAD50Q92878 1312 aa17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 LCTP09848 1927 aa17.15■□□□□ 0.34
SYNCRIP-203ENST00000444272 IGSF3O75054 1194 aa17.15■□□□□ 0.34
SYNCRIP-203ENST00000444272 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
SYNCRIP-203ENST00000444272 AOC1P19801 751 aa17.15■□□□□ 0.34
SYNCRIP-203ENST00000444272 IFIH1Q9BYX4 1025 aaKnown RBP17.15■□□□□ 0.34
SYNCRIP-203ENST00000444272 RWDD3Q9Y3V2 267 aa17.15■□□□□ 0.34
SYNCRIP-203ENST00000444272 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
SYNCRIP-203ENST00000444272 CDV3Q9UKY7 258 aaKnown RBP17.14■□□□□ 0.33
SYNCRIP-203ENST00000444272 A6NJR5 290 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 OAZ1P54368 228 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 RBM10P98175 930 aaKnown RBP17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 SESTD1Q86VW0 696 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 CRIPAKQ8N1N5 446 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 WNT8BQ93098 351 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 RIOK1Q9BRS2 568 aaKnown RBP17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 KANSL2Q9H9L4 492 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 RNF146Q9NTX7 359 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 PTPRCP08575 1304 aa17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 ASH1LQ9NR48 2969 aaKnown RBP17.13■□□□□ 0.33
SYNCRIP-203ENST00000444272 SOBPA7XYQ1 873 aa17.12■□□□□ 0.33
SYNCRIP-203ENST00000444272 DNAJB1P25685 340 aa17.12■□□□□ 0.33
SYNCRIP-203ENST00000444272 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
SYNCRIP-203ENST00000444272 PURBQ96QR8 312 aaKnown RBP17.12■□□□□ 0.33
SYNCRIP-203ENST00000444272 EMSYQ7Z589 1322 aa17.12■□□□□ 0.33
SYNCRIP-203ENST00000444272 FANCMQ8IYD8 2048 aa17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 MAST4O15021 2626 aa17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 TRIM71Q2Q1W2 868 aaKnown RBP17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 PLEKHG4Q58EX7 1191 aa17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 CCDC158Q5M9N0 1113 aa17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 RIN2Q8WYP3 895 aaPredicted RBP17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 COPS5Q92905 334 aa17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 RTKNQ9BST9 563 aa17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 PLAGL2Q9UPG8 496 aa17.11■□□□□ 0.33
SYNCRIP-203ENST00000444272 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.1■□□□□ 0.33
SYNCRIP-203ENST00000444272 PTK7Q13308 1070 aa17.1■□□□□ 0.33
SYNCRIP-203ENST00000444272 ZC3H14Q6PJT7 736 aaKnown RBP17.1■□□□□ 0.33
SYNCRIP-203ENST00000444272 MRPL50Q8N5N7 158 aaKnown RBP17.1■□□□□ 0.33
SYNCRIP-203ENST00000444272 MORC4Q8TE76 937 aa17.1■□□□□ 0.33
SYNCRIP-203ENST00000444272 SDR42E1Q8WUS8 393 aa17.1■□□□□ 0.33
SYNCRIP-203ENST00000444272 GTF2IRD1Q9UHL9 959 aa17.1■□□□□ 0.33
SYNCRIP-203ENST00000444272 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
SYNCRIP-203ENST00000444272 RBM47A0AV96 593 aaKnown RBP17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 F5H6K3 240 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 NDUFB10O96000 172 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 ASGR2P07307 311 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 NPR3P17342 541 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 KLRC3Q07444 240 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 RTP3Q9BQQ7 232 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 APOL5Q9BWW9 433 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 ADGRA3Q8IWK6 1321 aa17.09■□□□□ 0.33
SYNCRIP-203ENST00000444272 MAGEB6P1A0A0J9YX57 407 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 C2CD4DB7Z1M9 353 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 SRGAP3O43295 1099 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 ZIC2O95409 532 aaPredicted RBP17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 CDK8P49336 464 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 PPM1JQ5JR12 505 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 VN1R2Q8NFZ6 395 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 SEPT8Q92599 483 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 TRERF1Q96PN7 1200 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 NEK1Q96PY6 1258 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 PLVAPQ9BX97 442 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 CYP39A1Q9NYL5 469 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 NCDNQ9UBB6 729 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 HDAC6Q9UBN7 1215 aa17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.32
SYNCRIP-203ENST00000444272 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 PRR5-ARHGAP8B1AHC4 643 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 RSPH10B2B2RC85 870 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 PER2O15055 1255 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 NKRFO15226 690 aaKnown RBP eCLIP17.07■□□□□ 0.322e-7■□□□□ 8.7
SYNCRIP-203ENST00000444272 RSPH10BP0C881 870 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 ARHGAP8P85298 464 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 LRRC47Q8N1G4 583 aaKnown RBP17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 C7orf31Q8N865 590 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 SUMF1Q8NBK3 374 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 TLE6Q9H808 572 aa17.07■□□□□ 0.32
SYNCRIP-203ENST00000444272 BAZ2AQ9UIF9 1905 aaKnown RBP17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 ITGB1P05556 798 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 ALAS1P13196 640 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 LMNB2Q03252 620 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 PDE4BQ07343 736 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 SPPL3Q8TCT6 385 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 ATP8B4Q8TF62 1192 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 KAT2BQ92831 832 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 S1PR5Q9H228 398 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 FEM1BQ9UK73 627 aa17.06■□□□□ 0.32
SYNCRIP-203ENST00000444272 ALDH5A1P51649 535 aaPredicted RBP17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 ZNF200P98182 395 aaPredicted RBP17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 MUM1L1Q5H9M0 696 aa17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 NSMFQ6X4W1 530 aa17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 POF1BQ8WVV4 589 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms