RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CALM1P0DP23 149 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 CALM2P0DP24 149 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 CALM3P0DP25 149 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 HSPA4P34932 840 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 CCL23P55773 120 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 STXBP2Q15833 593 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 TSGA10IPQ3SY00 556 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 ARHGEF16Q5VV41 709 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 PSRC1Q6PGN9 363 aaPredicted RBP16.21■□□□□ 0.19
TREX1-202ENST00000444177 SEPT14Q6ZU15 432 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 DHX32Q7L7V1 743 aaKnown RBP16.21■□□□□ 0.19
TREX1-202ENST00000444177 JAKMIP1Q96N16 626 aaKnown RBP16.21■□□□□ 0.19
TREX1-202ENST00000444177 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 BAZ2BQ9UIF8 2168 aaKnown RBP16.21■□□□□ 0.19
TREX1-202ENST00000444177 TMEM265A0A087WTH1 108 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 OPLAHO14841 1288 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 FGBP02675 491 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
TREX1-202ENST00000444177 EIF2AK2P19525 551 aaKnown RBP16.2■□□□□ 0.18
TREX1-202ENST00000444177 DNAJB2P25686 324 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 GNAQP50148 359 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 TRAF1Q13077 416 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 LY6KQ17RY6 165 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 SYNE3Q6ZMZ3 975 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 SGMS1Q86VZ5 419 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 HERVK_113Q902F9 699 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 WNT8AQ9H1J5 351 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 SNX14Q9Y5W7 946 aa16.2■□□□□ 0.18
TREX1-202ENST00000444177 PNMA6FA0A0J9YX94 578 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 GRXCR1A8MXD5 290 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 DLL1O00548 723 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 EIF3JO75822 258 aaKnown RBP16.19■□□□□ 0.18
TREX1-202ENST00000444177 NR3C2P08235 984 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 CYP2C9P11712 490 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 HSD17B4P51659 736 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 FGD1P98174 961 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 EXOSC10Q01780 885 aaKnown RBP16.19■□□□□ 0.18
TREX1-202ENST00000444177 GHRHRQ02643 423 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 PPP1R13LQ8WUF5 828 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 AFG1LQ8WV93 481 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 MYLIPQ8WY64 445 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 RRP36Q96EU6 259 aaKnown RBP16.19■□□□□ 0.18
TREX1-202ENST00000444177 LZTS2Q9BRK4 669 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 SPZ1Q9BXG8 430 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
TREX1-202ENST00000444177 MAP3K20Q9NYL2 800 aaKnown RBP16.19■□□□□ 0.18
TREX1-202ENST00000444177 SEC63Q9UGP8 760 aaKnown RBP16.19■□□□□ 0.18
TREX1-202ENST00000444177 GH1P01241 217 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 CPA1P15085 419 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 ARHGAP1Q07960 439 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 FAM47CQ5HY64 1035 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 NFRKBQ6P4R8 1299 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 BLOC1S2Q6QNY1 142 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 RPUSD2Q8IZ73 545 aaKnown RBP16.18■□□□□ 0.18
TREX1-202ENST00000444177 CMTR1Q8N1G2 835 aaKnown RBP16.18■□□□□ 0.18
TREX1-202ENST00000444177 SRBD1Q8N5C6 995 aaKnown RBP16.18■□□□□ 0.18
TREX1-202ENST00000444177 SAMD3Q8N6K7 520 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 KCNB2Q92953 911 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 TIFAQ96CG3 184 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 SCLYQ96I15 445 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 CXXC1Q9P0U4 656 aaPredicted RBP16.18■□□□□ 0.18
TREX1-202ENST00000444177 DDX41Q9UJV9 622 aaKnown RBP16.18■□□□□ 0.18
TREX1-202ENST00000444177 NAP1L2Q9ULW6 460 aaPredicted RBP16.18■□□□□ 0.18
TREX1-202ENST00000444177 GTF3C3Q9Y5Q9 886 aa16.18■□□□□ 0.18
TREX1-202ENST00000444177 CDH23Q9H251 3354 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 SCN10AQ9Y5Y9 1956 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 KLF18A0A0U1RQI7 1052 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 ZBTB43O43298 467 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 HOXA13P31271 388 aaPredicted RBP16.17■□□□□ 0.18
TREX1-202ENST00000444177 PBX2P40425 430 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
TREX1-202ENST00000444177 GRIN2CQ14957 1233 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 TMTC3Q6ZXV5 915 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 OTOP2Q7RTS6 562 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 VWCEQ96DN2 955 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 PBX4Q9BYU1 374 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 ZNF576Q9H609 170 aa16.17■□□□□ 0.18
TREX1-202ENST00000444177 GOLGA8AA7E2F4 631 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 GOLGA8BA8MQT2 603 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
TREX1-202ENST00000444177 MMP3P08254 477 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 POLR2MP0CAP2 368 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 SMARCA1P28370 1054 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 CHMP4BP1P59074 171 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 RTN1Q16799 776 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 Q6ZUG5 572 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 VSIG10LQ86VR7 867 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 CCDC82Q8N4S0 544 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 FANCBQ8NB91 859 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 MAFAQ8NHW3 353 aaPredicted RBP16.16■□□□□ 0.18
TREX1-202ENST00000444177 PDCD2LQ9BRP1 358 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 MTIF3Q9H2K0 278 aaKnown RBP16.16■□□□□ 0.18
TREX1-202ENST00000444177 RBM28Q9NW13 759 aaKnown RBP16.16■□□□□ 0.18
TREX1-202ENST00000444177 BRPF3Q9ULD4 1205 aa16.16■□□□□ 0.18
TREX1-202ENST00000444177 EPB41L2O43491 1005 aaKnown RBP16.15■□□□□ 0.18
TREX1-202ENST00000444177 RGS20O76081 388 aa16.15■□□□□ 0.18
TREX1-202ENST00000444177 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
TREX1-202ENST00000444177 FOSL2P15408 326 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms