RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MTHFSDQ2M296 383 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 ACCSLQ4AC99 568 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 E4F1Q66K89 784 aaPredicted RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 THOC7Q6I9Y2 204 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.06□□□□□ -1.92
LIG4-203ENST00000442234 EHBP1Q8NDI1 1231 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MORC4Q8TE76 937 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ZNF296Q8WUU4 475 aaPredicted RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 PPP1R14BQ96C90 147 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MASTLQ96GX5 879 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 INTS4Q96HW7 963 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 MYD88Q99836 296 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 OSBPL10Q9BXB5 764 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 DRC3Q9H069 523 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 IFNKQ9P0W0 207 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 IMPACTQ9P2X3 320 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 C15orf41Q9Y2V0 281 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 LUC7L2Q9Y383 392 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 KNDC1Q76NI1 1749 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 GPR179Q6PRD1 2367 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 CAMTA1Q9Y6Y1 1673 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 A0A1B0GVG6 124 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PLEKHG3A1L390 1219 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 LRRIQ3A6PVS8 624 aaPredicted RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 ZBBXA8MT70 800 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 SMNDC1O75940 238 aaKnown RBP eCLIP3.06□□□□□ -1.92
LIG4-203ENST00000442234 UPP2O95045 317 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 GNAT2P19087 354 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 IGBP1P78318 339 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 FSTL1Q12841 308 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 KRT72Q14CN4 511 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 INAQ16352 499 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 TSNAXIP1Q2TAA8 658 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 LONRF3Q496Y0 759 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MTHFD1LQ6UB35 978 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 COPS6Q7L5N1 327 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 FUKQ8N0W3 1084 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 SIX5Q8N196 739 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 STAG2Q8N3U4 1231 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 TTC30BQ8N4P2 665 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.06□□□□□ -1.92
LIG4-203ENST00000442234 SAMD3Q8N6K7 520 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ANKK1Q8NFD2 765 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 KLHDC4Q8TBB5 520 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 HAUS1Q96CS2 278 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 DCAF5Q96JK2 942 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 SLC4A9Q96Q91 983 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 IWS1Q96ST2 819 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 NDEL1Q9GZM8 345 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 EHD4Q9H223 541 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PREBQ9HCU5 417 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 GPCPD1Q9NPB8 672 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PPANQ9NQ55 473 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 SEC31BQ9NQW1 1179 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 CFAP45Q9UL16 551 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 CHMP2BQ9UQN3 213 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 CEP152O94986 1710 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 KIAA1551Q9HCM1 1747 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ACACBO00763 2458 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PSMD14O00487 310 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 SLC26A4O43511 780 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ZFYP08048 801 aaPredicted RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 ELNP15502 786 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ALDH1B1P30837 517 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 STIP1P31948 543 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 PDE6CP51160 858 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 GUCY2FP51841 1108 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 KIF11P52732 1056 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 VSNL1P62760 191 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ATP11AP98196 1134 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 PPARDQ03181 441 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ZBTB17Q13105 803 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 DRP2Q13474 957 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 CPLX4Q7Z7G2 160 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 TTC16Q8NEE8 873 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 MPP4Q96JB8 637 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 CLMNQ96JQ2 1002 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 DNAI2Q9GZS0 605 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 LZTFL1Q9NQ48 299 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ATXN10Q9UBB4 475 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 DKK3Q9UBP4 350 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 SEL1LQ9UBV2 794 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 L1RE1Q9UN81 338 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 LAMA2P24043 3122 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 IQGAP3Q86VI3 1631 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 BRWD3Q6RI45 1802 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 TRPM2O94759 1503 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ARHGAP31Q2M1Z3 1444 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 CTAGE9A4FU28 777 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 FAM196BA6NMK8 535 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 GOLGA8KD6RF30 607 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 H7C1W4 665 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 TNRC18O15417 2968 aaPredicted RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 CBFA2T2O43439 604 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 HIP1RO75146 1068 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 FGFR1OPO95684 399 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 MMEP08473 750 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 GGCXP38435 758 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 MRPS35P82673 323 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 IKQ13123 557 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms