RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ITIH6Q6UXX5 1313 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 PHIPQ8WWQ0 1821 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 CCP110O43303 1012 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 SKILP12757 684 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 ZNF76P36508 570 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 PRCPP42785 496 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 PRELPP51888 382 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 STX17P56962 302 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 GHRHRQ02643 423 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 PRR16Q569H4 304 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 SPECC1LQ69YQ0 1117 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 MCF2L2Q86YR7 1114 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 FAM114A1Q8IWE2 563 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 LENG9Q96B70 501 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 WDR18Q9BV38 432 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 GLIS2Q9BZE0 524 aaPredicted RBP14.74□□□□□ -0.05
CPSF4-206ENST00000441580 THAP9Q9H5L6 903 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 SAMSN1Q9NSI8 373 aaKnown RBP14.74□□□□□ -0.05
CPSF4-206ENST00000441580 INTS13Q9NVM9 706 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.74□□□□□ -0.05
CPSF4-206ENST00000441580 LIMA1Q9UHB6 759 aaKnown RBP14.74□□□□□ -0.05
CPSF4-206ENST00000441580 ZNF112Q9UJU3 913 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 CCPG1Q9ULG6 757 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 SBF1O95248 1867 aa14.74□□□□□ -0.05
CPSF4-206ENST00000441580 LOC285556D6RIA3 1793 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 EEF1GP26641 437 aaKnown RBP14.73□□□□□ -0.05
CPSF4-206ENST00000441580 PSMD2Q13200 908 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 TRIM14Q14142 442 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 MCM6Q14566 821 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 DNTTIP2Q5QJE6 756 aaKnown RBP14.73□□□□□ -0.05
CPSF4-206ENST00000441580 FOXR2Q6PJQ5 311 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 LDHDQ86WU2 507 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 PRPF38AQ8NAV1 312 aaKnown RBP14.73□□□□□ -0.05
CPSF4-206ENST00000441580 TRIM47Q96LD4 638 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 PICK1Q9NRD5 415 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 BMP2KQ9NSY1 1161 aaPredicted RBP14.73□□□□□ -0.05
CPSF4-206ENST00000441580 GGA3Q9NZ52 723 aa14.73□□□□□ -0.05
CPSF4-206ENST00000441580 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 KCNJ18B7U540 433 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 CFBP00751 764 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 TPM2P07951 284 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 TPM1P09493 284 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 CCNE1P24864 410 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 HOXA13P31271 388 aaPredicted RBP14.72□□□□□ -0.05
CPSF4-206ENST00000441580 HSD17B4P51659 736 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 KCNJ12Q14500 433 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 NOL9Q5SY16 702 aaKnown RBP14.72□□□□□ -0.05
CPSF4-206ENST00000441580 ANGEL2Q5VTE6 544 aaKnown RBP14.72□□□□□ -0.05
CPSF4-206ENST00000441580 ARMCX5Q6P1M9 558 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 FCHSD1Q86WN1 690 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 P2RX5Q93086 422 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 C12orf42Q96LP6 360 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 NAP1L5Q96NT1 182 aaPredicted RBP14.72□□□□□ -0.05
CPSF4-206ENST00000441580 P2RX7Q99572 595 aaKnown RBP14.72□□□□□ -0.05
CPSF4-206ENST00000441580 TANGO6Q9C0B7 1094 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 MAP3K20Q9NYL2 800 aaKnown RBP14.72□□□□□ -0.05
CPSF4-206ENST00000441580 MAGEC2Q9UBF1 373 aaPredicted RBP14.72□□□□□ -0.05
CPSF4-206ENST00000441580 ADD3Q9UEY8 706 aaKnown RBP14.72□□□□□ -0.05
CPSF4-206ENST00000441580 PPP1R9AQ9ULJ8 1098 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 SSC5DA1L4H1 1573 aa14.72□□□□□ -0.05
CPSF4-206ENST00000441580 ASTN2O75129 1339 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-206ENST00000441580 RPTORQ8N122 1335 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 MYMKA6NI61 221 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 FAM86B1E9PN63 330 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 KIF2AO00139 706 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-206ENST00000441580 FAM86B2P0C5J1 330 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 VCAM1P19320 739 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 SPIRE1Q08AE8 756 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 TBX2Q13207 712 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-206ENST00000441580 MTMR2Q13614 643 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 NR1I3Q14994 352 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 APTXQ7Z2E3 356 aaKnown RBP14.71□□□□□ -0.05
CPSF4-206ENST00000441580 KRT26Q7Z3Y9 468 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 TRPM4Q8TD43 1214 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 WRNIP1Q96S55 665 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 SLC38A10Q9HBR0 1119 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 FBXO28Q9NVF7 368 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 VAV3Q9UKW4 847 aa14.71□□□□□ -0.05
CPSF4-206ENST00000441580 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-206ENST00000441580 FRMPD4Q14CM0 1322 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 IGLV3-22A0A075B6J6 115 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 POTEB3A0JP26 581 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 POTECB2RU33 542 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 MSH4O15457 936 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 KIF20AO95235 890 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 FGFR1OPO95684 399 aaKnown RBP14.7□□□□□ -0.06
CPSF4-206ENST00000441580 TAL1P17542 331 aaPredicted RBP14.7□□□□□ -0.06
CPSF4-206ENST00000441580 MUTP22033 750 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 RPA1P27694 616 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 COPB1P53618 953 aaKnown RBP14.7□□□□□ -0.06
CPSF4-206ENST00000441580 ARID5BQ14865 1188 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 KRT31Q15323 416 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 HSP90AA4PQ58FG1 418 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 TCP11X2Q5H9J9 407 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 NBPF12Q5TAG4 269 aaPredicted RBP14.7□□□□□ -0.06
CPSF4-206ENST00000441580 NCAPH2Q6IBW4 605 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 TTI2Q6NXR4 508 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 POTEBQ6S5H4 581 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 NIPA1Q7RTP0 329 aa14.7□□□□□ -0.06
CPSF4-206ENST00000441580 CCDC84Q86UT8 332 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms