RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 PSTPIP2Q9H939 334 aa27.67■■■□□ 2.02
CPNE1-217ENST00000439669 FAM217BQ9NTX9 383 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-217ENST00000439669 KIAA1217Q5T5P2 1943 aa27.67■■■□□ 2.02
CPNE1-217ENST00000439669 CCDC196A0A1B0GTZ2 297 aa27.66■■■□□ 2.02
CPNE1-217ENST00000439669 TRIM43BA6NCK2 446 aa27.66■■■□□ 2.02
CPNE1-217ENST00000439669 GH1P01241 217 aa27.66■■■□□ 2.02
CPNE1-217ENST00000439669 TRIM43Q96BQ3 446 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-217ENST00000439669 ZFP91Q96JP5 570 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-217ENST00000439669 ZSWIM6Q9HCJ5 1215 aa27.66■■■□□ 2.02
CPNE1-217ENST00000439669 TMEM39AQ9NV64 488 aa27.66■■■□□ 2.02
CPNE1-217ENST00000439669 CYP46A1Q9Y6A2 500 aa27.66■■■□□ 2.02
CPNE1-217ENST00000439669 TRIOBPQ9H2D6 2365 aa27.66■■■□□ 2.02
CPNE1-217ENST00000439669 A0A1W2PPC1 479 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 PIK3CDO00329 1044 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 CDK7P50613 346 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 PSMC6P62333 389 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 FUT2Q10981 343 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 ITGA7Q13683 1181 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 FBXL16Q8N461 479 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 AGXT2Q9BYV1 514 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 V9GY48 417 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-217ENST00000439669 FRMPD4Q14CM0 1322 aa27.65■■■□□ 2.02
CPNE1-217ENST00000439669 LTBP2Q14767 1821 aa27.64■■■□□ 2.02
CPNE1-217ENST00000439669 MEIS2O14770 477 aa27.64■■■□□ 2.02
CPNE1-217ENST00000439669 ADD1P35611 737 aaKnown RBP27.64■■■□□ 2.02
CPNE1-217ENST00000439669 PURAQ00577 322 aaKnown RBP27.64■■■□□ 2.02
CPNE1-217ENST00000439669 FAAP100Q0VG06 881 aa27.64■■■□□ 2.02
CPNE1-217ENST00000439669 WWC2Q6AWC2 1192 aa27.64■■■□□ 2.02
CPNE1-217ENST00000439669 UPF3BQ9BZI7 483 aaKnown RBP27.64■■■□□ 2.02
CPNE1-217ENST00000439669 DDX41Q9UJV9 622 aaKnown RBP27.64■■■□□ 2.02
CPNE1-217ENST00000439669 A6NJR5 290 aa27.63■■■□□ 2.01
CPNE1-217ENST00000439669 TLR3O15455 904 aaKnown RBP27.63■■■□□ 2.01
CPNE1-217ENST00000439669 NAPAP54920 295 aa27.63■■■□□ 2.01
CPNE1-217ENST00000439669 ARHGAP1Q07960 439 aa27.63■■■□□ 2.01
CPNE1-217ENST00000439669 FAM126BQ8IXS8 530 aa27.63■■■□□ 2.01
CPNE1-217ENST00000439669 AFG1LQ8WV93 481 aa27.63■■■□□ 2.01
CPNE1-217ENST00000439669 BADQ92934 168 aa27.63■■■□□ 2.01
CPNE1-217ENST00000439669 MTG1Q9BT17 334 aaPredicted RBP27.63■■■□□ 2.01
CPNE1-217ENST00000439669 TM6SF1Q9BZW5 370 aa27.63■■■□□ 2.01
CPNE1-217ENST00000439669 KIAA0355O15063 1070 aa27.62■■■□□ 2.01
CPNE1-217ENST00000439669 KPNA6O60684 536 aa27.62■■■□□ 2.01
CPNE1-217ENST00000439669 RGS20O76081 388 aa27.62■■■□□ 2.01
CPNE1-217ENST00000439669 RAG1P15918 1043 aa27.62■■■□□ 2.01
CPNE1-217ENST00000439669 UBE2SQ16763 222 aa27.62■■■□□ 2.01
CPNE1-217ENST00000439669 GRIN2DO15399 1336 aa27.62■■■□□ 2.01
CPNE1-217ENST00000439669 NID2Q14112 1375 aa27.61■■■□□ 2.01
CPNE1-217ENST00000439669 FXR1P51114 621 aaKnown RBP eCLIP27.61■■■□□ 2.01
CPNE1-217ENST00000439669 KCNV1Q6PIU1 500 aa27.61■■■□□ 2.01
CPNE1-217ENST00000439669 SLC43A3Q8NBI5 491 aa27.61■■■□□ 2.01
CPNE1-217ENST00000439669 MMP3P08254 477 aa27.6■■■□□ 2.01
CPNE1-217ENST00000439669 TOB2Q14106 344 aaPredicted RBP27.6■■■□□ 2.01
CPNE1-217ENST00000439669 GNPTABQ3T906 1256 aa27.6■■■□□ 2.01
CPNE1-217ENST00000439669 PPP1R18Q6NYC8 613 aa27.6■■■□□ 2.01
CPNE1-217ENST00000439669 DHX37Q8IY37 1157 aaKnown RBP27.6■■■□□ 2.01
CPNE1-217ENST00000439669 TDHQ8IZJ6 230 aa27.6■■■□□ 2.01
CPNE1-217ENST00000439669 SEZ6LQ9BYH1 1024 aa27.6■■■□□ 2.01
CPNE1-217ENST00000439669 TBX21Q9UL17 535 aa27.6■■■□□ 2.01
CPNE1-217ENST00000439669 DNAH12Q6ZR08 3092 aa27.6■■■□□ 2.01
CPNE1-217ENST00000439669 SPDYE3A6NKU9 549 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 hCG_1984214I3L0E3 225 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 SORBS3O60504 671 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 STAM2O75886 525 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 ITGB8P26012 769 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 MRPS9P82933 396 aaKnown RBP27.59■■■□□ 2.01
CPNE1-217ENST00000439669 LAMC2Q13753 1193 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 TYW1BQ6NUM6 668 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 ZNF713Q8N859 430 aaPredicted RBP27.59■■■□□ 2.01
CPNE1-217ENST00000439669 PDRG1Q9NUG6 133 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 RTEL1Q9NZ71 1219 aa27.59■■■□□ 2.01
CPNE1-217ENST00000439669 STXBP3O00186 592 aa27.58■■■□□ 2.01
CPNE1-217ENST00000439669 EIF5BO60841 1220 aaKnown RBP27.58■■■□□ 2.01
CPNE1-217ENST00000439669 UBA1P22314 1058 aaKnown RBP27.58■■■□□ 2.01
CPNE1-217ENST00000439669 PDIA3P30101 505 aaKnown RBP27.58■■■□□ 2.01
CPNE1-217ENST00000439669 CHMP4BP1P59074 171 aa27.58■■■□□ 2.01
CPNE1-217ENST00000439669 CCT2P78371 535 aaKnown RBP27.58■■■□□ 2.01
CPNE1-217ENST00000439669 FAM47CQ5HY64 1035 aa27.58■■■□□ 2.01
CPNE1-217ENST00000439669 PCNX4Q63HM2 1172 aa27.58■■■□□ 2.01
CPNE1-217ENST00000439669 EMID1Q96A84 441 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-217ENST00000439669 BARHL2Q9NY43 387 aa27.58■■■□□ 2.01
CPNE1-217ENST00000439669 GGPS1O95749 300 aa27.57■■■□□ 2
CPNE1-217ENST00000439669 CD4P01730 458 aa27.57■■■□□ 2
CPNE1-217ENST00000439669 TGFB3P10600 412 aa27.57■■■□□ 2
CPNE1-217ENST00000439669 ADCY7P51828 1080 aa27.57■■■□□ 2
CPNE1-217ENST00000439669 EVCP57679 992 aa27.57■■■□□ 2
CPNE1-217ENST00000439669 AKAP17AQ02040 695 aaKnown RBP27.57■■■□□ 2
CPNE1-217ENST00000439669 XRRA1Q6P2D8 792 aa27.57■■■□□ 2
CPNE1-217ENST00000439669 INPP4AQ96PE3 977 aaPredicted RBP27.57■■■□□ 2
CPNE1-217ENST00000439669 EHMT1Q9H9B1 1298 aa27.57■■■□□ 2
CPNE1-217ENST00000439669 NCOA5Q9HCD5 579 aaKnown RBP27.57■■■□□ 2
CPNE1-217ENST00000439669 RIC8AQ9NPQ8 531 aa27.57■■■□□ 2
CPNE1-217ENST00000439669 SCG2P13521 617 aa27.56■■■□□ 2
CPNE1-217ENST00000439669 DGKDQ16760 1214 aa27.56■■■□□ 2
CPNE1-217ENST00000439669 PFKFB3Q16875 520 aaPredicted RBP27.56■■■□□ 2
CPNE1-217ENST00000439669 CELF3Q5SZQ8 465 aaKnown RBP27.56■■■□□ 2
CPNE1-217ENST00000439669 PPTC7Q8NI37 304 aa27.56■■■□□ 2
CPNE1-217ENST00000439669 PHKBQ93100 1093 aa27.56■■■□□ 2
CPNE1-217ENST00000439669 LARP6Q9BRS8 491 aaKnown RBP27.56■■■□□ 2
CPNE1-217ENST00000439669 PPP1R12CQ9BZL4 782 aa27.56■■■□□ 2
CPNE1-217ENST00000439669 TRPV6Q9H1D0 765 aa27.56■■■□□ 2
CPNE1-217ENST00000439669 PCDHA6Q9UN73 950 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms