RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CLNS1AP54105 237 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 HERVK_113P62684 666 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 GSTO1P78417 241 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 TCP11X2Q5H9J9 407 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 POTEDQ86YR6 584 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 REXO1Q8N1G1 1221 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 MTRQ99707 1265 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 DBNDD1Q9H9R9 158 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 DISC1Q9NRI5 854 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 SEPT11Q9NVA2 429 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 GOLGA6L10A6NI86 522 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 TDP2O95551 362 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 SERPINB2P05120 415 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 IFNAR2P48551 515 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 FUT2Q10981 343 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 PPP2R5BQ15173 497 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 CCDC40Q4G0X9 1142 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 TCERG1LQ5VWI1 586 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 RNPC3Q96LT9 517 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 AP1M1Q9BXS5 423 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 DPH5Q9H2P9 285 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 CD209Q9NNX6 404 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 PCDHA6Q9UN73 950 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 PCDHA8Q9Y5H6 950 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 OPLAHO14841 1288 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 CYLC1P35663 651 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 KCNJ6P48051 423 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 STK4Q13043 487 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 SPICE1Q8N0Z3 855 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 MSANTD4Q8NCY6 345 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 TCP11Q8WWU5 503 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 SELENOSQ9BQE4 189 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 TUBGCP2Q9BSJ2 902 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZNF287Q9HBT7 754 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 MLXIPLQ9NP71 852 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP40Q9NVE5 1235 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 KIF1AQ12756 1690 aa10.98□□□□□ -0.65
CDC42SE1-202ENST00000439374 CLTAP09496 248 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 OR52Z1P0C646 297 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 SARSP49591 514 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 GFPT1Q06210 699 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 MGARPQ8TDB4 240 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 THOC1Q96FV9 657 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 RBM12Q9NTZ6 932 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 PKD2L1Q9P0L9 805 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 SCAF8Q9UPN6 1271 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 SPATA31A5Q5VU36 1347 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 SPATA31A7Q8IWB4 1347 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 TRAF5O00463 557 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 HEXIM1O94992 359 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 CALCRLQ16602 461 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZNF658Q5TYW1 1059 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 SLC30A10Q6XR72 485 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 CCDC121Q6ZUS5 278 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZIM3Q96PE6 472 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 HAUS2Q9NVX0 235 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 MEIS1O00470 390 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 TACC1O75410 805 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 EIF4A3P38919 411 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 MAGEA1P43355 309 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 SPAG1Q07617 926 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 DHX9Q08211 1270 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 PLS1Q14651 629 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 RAB21Q9UL25 225 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 BCS1LQ9Y276 419 aa10.97□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L15C9J2P7 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L13C9JLJ4 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L11C9JVI0 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L18D6R9N7 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L22D6RA61 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L17D6RBQ6 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L19D6RCP7 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L20D6RJB6 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 AGPSO00116 658 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 KIF4AO95239 1232 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 GNA11P29992 359 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZNF76P36508 570 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 VAV2P52735 878 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 CKAP4Q07065 602 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L24Q0WX57 530 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 TMEM266Q2M3C6 531 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L6PQ6QN14 398 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 CCNI2Q6ZMN8 369 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 NEK8Q86SG6 692 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 CNOT6LQ96LI5 555 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 PSD3Q9NYI0 1048 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 ODF2LQ9ULJ1 636 aa10.96□□□□□ -0.65
CDC42SE1-202ENST00000439374 USO1O60763 962 aaKnown RBP10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 AKR1B1P15121 316 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 RASA1P20936 1047 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 PAX7P23759 505 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 USP8P40818 1118 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 SLCO1A2P46721 670 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 UBXN2AP68543 259 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 IFFO1Q0D2I5 559 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 PPFIA1Q13136 1202 aa10.96□□□□□ -0.66
CDC42SE1-202ENST00000439374 GRAPQ13588 217 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms