RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 C6orf222P0C671 652 aaPredicted RBP13.25□□□□□ -0.29
NEK1-201ENST00000439128 MYOZ2Q9NPC6 264 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 MYL7Q01449 175 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 RCSD1Q6JBY9 416 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 SYMPKQ92797 1274 aaKnown RBP13.25□□□□□ -0.29
NEK1-201ENST00000439128 ASIC3Q9UHC3 531 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 SEC24BO95487 1268 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 GAP43P17677 238 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 YY1P25490 414 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 FCGRTP55899 365 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 CLUL1Q15846 466 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 APOA5Q6Q788 366 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 SLC44A5Q8NCS7 719 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 RSAD2Q8WXG1 361 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 TPCN1Q9ULQ1 816 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 TECPR2O15040 1411 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 RIMS1Q86UR5 1692 aaKnown RBP13.25□□□□□ -0.29
NEK1-201ENST00000439128 THAP12O43422 761 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 JAK3P52333 1124 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 FAM117BQ6P1L5 589 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 LARP4BQ92615 738 aaKnown RBP13.25□□□□□ -0.29
NEK1-201ENST00000439128 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 NFE2L3Q9Y4A8 694 aa13.25□□□□□ -0.29
NEK1-201ENST00000439128 UPP2O95045 317 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 EPHX2P34913 555 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 CCDC84Q86UT8 332 aaPredicted RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 SIX6OS1Q8N1H7 587 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 TRIM7Q9C029 511 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 ZNF70Q9UC06 446 aaPredicted RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 SETD1BQ9UPS6 1966 aaKnown RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 COL23A1Q86Y22 540 aaPredicted RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 YAF2Q8IY57 180 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 PRPF38AQ8NAV1 312 aaKnown RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 ZSWIM5Q9P217 1185 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 HERC5Q9UII4 1024 aaKnown RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 LONRF3Q496Y0 759 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 TYW1BQ6NUM6 668 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 UBLCP1Q8WVY7 318 aaPredicted RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 PRPF31Q8WWY3 499 aaKnown RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 CACYBPQ9HB71 228 aaKnown RBP13.24□□□□□ -0.29
NEK1-201ENST00000439128 ZNF302Q9NR11 478 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 ERICH4A6NGS2 130 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 K7ERI5 159 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 SLC4A1P02730 911 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 MAN1A1P33908 653 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 THNSL1Q8IYQ7 743 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 TTC14Q96N46 770 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 NT5C1BQ96P26 610 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 MSTO1Q9BUK6 570 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 LAD1O00515 517 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 MAGEA1P43355 309 aa13.24□□□□□ -0.29
NEK1-201ENST00000439128 ABCD1P33897 745 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 PHKA2P46019 1235 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
NEK1-201ENST00000439128 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 TRIM31Q9BZY9 425 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 METTL14Q9HCE5 456 aaKnown RBP13.23□□□□□ -0.29
NEK1-201ENST00000439128 ZNF233A6NK53 670 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 GMNNO75496 209 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 RNF8O76064 485 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 PTK2Q05397 1052 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 SCARA5Q6ZMJ2 495 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 SRGAP1Q7Z6B7 1085 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 ZNF668Q96K58 619 aaPredicted RBP13.23□□□□□ -0.29
NEK1-201ENST00000439128 ZBTB5O15062 677 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 GSPT1P15170 499 aaKnown RBP13.23□□□□□ -0.29
NEK1-201ENST00000439128 PFKFB1P16118 471 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 FANCCQ00597 558 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 EPHA10Q5JZY3 1008 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 NSRP1Q9H0G5 558 aaKnown RBP13.23□□□□□ -0.29
NEK1-201ENST00000439128 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 RNF219Q5W0B1 726 aaPredicted RBP13.23□□□□□ -0.29
NEK1-201ENST00000439128 CEP128Q6ZU80 1094 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 MICALCLQ6ZW33 695 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
NEK1-201ENST00000439128 CLIC2O15247 247 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 DYNC1LI2O43237 492 aaPredicted RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 ATP2C2O75185 946 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 RPN1P04843 607 aaKnown RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 KRT10P13645 584 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 RPS12P25398 132 aaKnown RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 MFAP3P55082 362 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 RASSF7Q02833 373 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 PSMD2Q13200 908 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 ITPK1Q13572 414 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 ARMCX2Q7L311 632 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 SCN4BQ8IWT1 228 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 ZNF280CQ8ND82 737 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 PFDN6O15212 129 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 CEP104O60308 925 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 VEGFAP15692 232 aaPredicted RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 NSFP46459 744 aaKnown RBP13.22□□□□□ -0.29
NEK1-201ENST00000439128 SCRN1Q12765 414 aa13.22□□□□□ -0.29
NEK1-201ENST00000439128 ZNF449Q6P9G9 518 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms