RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 FLOT1O75955 427 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 TAL1P17542 331 aaPredicted RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 HOXA7P31268 230 aaPredicted RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 NAPAP54920 295 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 NR5A1Q13285 461 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 SNAPC2Q13487 334 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 COG2Q14746 738 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 MCTP1Q6DN14 999 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 CCDC174Q6PII3 467 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 GADL1Q6ZQY3 521 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 DIS3L2Q8IYB7 885 aaKnown RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 FAM177A1Q8N128 213 aaPredicted RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 ZNF713Q8N859 430 aaPredicted RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 DAGLBQ8NCG7 672 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 REPS2Q8NFH8 660 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 ATG4CQ96DT6 458 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 AMNQ9BXJ7 453 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 ZMYND12Q9H0C1 365 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 FOXP1Q9H334 677 aaPredicted RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 ZSCAN16Q9H4T2 348 aaPredicted RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 SLC38A10Q9HBR0 1119 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 DNAAF2Q9NVR5 837 aaKnown RBP8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 PCDHA4Q9UN74 947 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 DOLKQ9UPQ8 538 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 AGTPBP1Q9UPW5 1226 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 PCDHA1Q9Y5I3 950 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 TLL2Q9Y6L7 1015 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 DOCK1Q14185 1865 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 ESYT2A0FGR8 921 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 OPLAHO14841 1288 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 BAG4O95429 457 aaKnown RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 ICAM1P05362 532 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 ZBTB48P10074 688 aaPredicted RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 CETPP11597 493 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 ERCC3P19447 782 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 CALML3P27482 149 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 KRT2P35908 639 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 GTF2A2P52657 109 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 CLDN10P78369 228 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 DNM1Q05193 864 aaKnown RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 FSTL1Q12841 308 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 DPYDQ12882 1025 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 SAFBQ15424 915 aaKnown RBP eCLIP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 NOM1Q5C9Z4 860 aaKnown RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 EARS2Q5JPH6 523 aaKnown RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 GALNT17Q6IS24 598 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 RGMBQ6NW40 437 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 PPP1R18Q6NYC8 613 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 FASTKD5Q7L8L6 764 aaKnown RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 BPHLQ86WA6 291 aaPredicted RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 RASAL3Q86YV0 1011 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 NOSTRINQ8IVI9 506 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 BLIDQ8IZY5 108 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 SIX5Q8N196 739 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 CCDC148Q8NFR7 591 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 C1orf216Q8TAB5 229 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 CCDC12Q8WUD4 166 aaPredicted RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 BRI3BPQ8WY22 251 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 AGBL1Q96MI9 1066 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 P2RX7Q99572 595 aaKnown RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 RAVER2Q9HCJ3 691 aaKnown RBP8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 C6orf50Q9HD87 102 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 HOXC10Q9NYD6 342 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 PCDHA6Q9UN73 950 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 PCDHA8Q9Y5H6 950 aa8.06□□□□□ -1.12
LSM3P3-201ENST00000436601 MYPNQ86TC9 1320 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 FAM155AB1AL88 458 aaPredicted RBP8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 TLL1O43897 1013 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 ZBED4O75132 1171 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 GNA11P29992 359 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 TOB1P50616 345 aaPredicted RBP8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 ZNF157P51786 506 aaPredicted RBP8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 ADCY7P51828 1080 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 TMEM132BQ14DG7 1078 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 USH1GQ495M9 461 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 BRAPQ7Z569 592 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 CPXCR1Q8N123 301 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 RASGRP4Q8TDF6 673 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 CLEC4DQ8WXI8 215 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 PTPN18Q99952 460 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 SLC6A16Q9GZN6 736 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 ASCC2Q9H1I8 757 aaPredicted RBP8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 PSTPIP2Q9H939 334 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 RIC8AQ9NPQ8 531 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 TMEM260Q9NX78 707 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 CNPY2Q9Y2B0 182 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 RIPK3Q9Y572 518 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 ATP6V1DQ9Y5K8 247 aa8.05□□□□□ -1.12
LSM3P3-201ENST00000436601 CCL15-CCL14A0A0B4J2E2 113 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 BTBD19C9JJ37 291 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 PDHXO00330 501 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 MEIS2O14770 477 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 ATP2A1O14983 1001 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 PEX10O60683 326 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 CNMDO75829 334 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 MRPL12P52815 198 aaKnown RBP8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 OAZ1P54368 228 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms