RNA–Protein interactions for RNA: ENST00000435164.6

STRN4-203, Transcript of striatin 4, humanhuman

TSL 2

Gene STRN4, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-203ENST00000435164 VAT1LQ9HCJ6 419 aa16.31■□□□□ 0.2
STRN4-203ENST00000435164 EMILIN3Q9NT22 766 aa16.31■□□□□ 0.2
STRN4-203ENST00000435164 PNMA6FA0A0J9YX94 578 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
STRN4-203ENST00000435164 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
STRN4-203ENST00000435164 NDUFB10O96000 172 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 VCAM1P19320 739 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 ZNF543Q08ER8 600 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 DGKZQ13574 1117 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 CEP135Q66GS9 1140 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 SPECC1LQ69YQ0 1117 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 FCHSD1Q86WN1 690 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 ANKRD20A12PQ8NF67 263 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 BRI3BPQ8WY22 251 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 RWDD2AQ9UIY3 292 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 AGTPBP1Q9UPW5 1226 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 PPP1R3GB7ZBB8 358 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 ADAMTS3O15072 1205 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 RPN1P04843 607 aaKnown RBP16.3■□□□□ 0.2
STRN4-203ENST00000435164 SLC1A4P43007 532 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 KCNB1Q14721 858 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 ANKRD23Q86SG2 305 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 GMCL1Q96IK5 515 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 NAP1L4Q99733 375 aaKnown RBP16.3■□□□□ 0.2
STRN4-203ENST00000435164 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
STRN4-203ENST00000435164 THSD7BQ9C0I4 1608 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 FRMPD2Q68DX3 1309 aaPredicted RBP16.29■□□□□ 0.2
STRN4-203ENST00000435164 A0A1B0GTH6 734 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 RRP9O43818 475 aaKnown RBP16.29■□□□□ 0.2
STRN4-203ENST00000435164 PPP1R2P41236 205 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 TM4SF4P48230 202 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 STIM1Q13586 685 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 CCDC96Q2M329 555 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
STRN4-203ENST00000435164 ZIC5Q96T25 663 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 TANGO6Q9C0B7 1094 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 TMEM60Q9H2L4 133 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 RPAP3Q9H6T3 665 aaPredicted RBP16.29■□□□□ 0.2
STRN4-203ENST00000435164 PNMA3Q9UL41 463 aa16.29■□□□□ 0.2
STRN4-203ENST00000435164 USP17L15C9J2P7 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 BTBD19C9JJ37 291 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 USP17L13C9JLJ4 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 USP17L11C9JVI0 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 USP17L18D6R9N7 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 USP17L22D6RA61 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 USP17L17D6RBQ6 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 USP17L19D6RCP7 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 USP17L20D6RJB6 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 BMP3P12645 472 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 OSBPP22059 807 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 HOXA7P31268 230 aaPredicted RBP16.28■□□□□ 0.2
STRN4-203ENST00000435164 MRPL12P52815 198 aaKnown RBP16.28■□□□□ 0.2
STRN4-203ENST00000435164 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
STRN4-203ENST00000435164 AMPD3Q01432 767 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 USP17L24Q0WX57 530 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 PAK1Q13153 545 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 TBX2Q13207 712 aaPredicted RBP16.28■□□□□ 0.2
STRN4-203ENST00000435164 MOGSQ13724 837 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 NR1I3Q14994 352 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 KARSQ15046 597 aaKnown RBP16.28■□□□□ 0.2
STRN4-203ENST00000435164 TMEM266Q2M3C6 531 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 KIAA1755Q5JYT7 1200 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 TREML2Q5T2D2 321 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 CDKAL1Q5VV42 579 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 KLHL10Q6JEL2 608 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 TBCKQ8TEA7 893 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 ZCCHC17Q9NP64 241 aaKnown RBP16.28■□□□□ 0.2
STRN4-203ENST00000435164 SAMSN1Q9NSI8 373 aaKnown RBP16.28■□□□□ 0.2
STRN4-203ENST00000435164 SLC45A1Q9Y2W3 748 aa16.28■□□□□ 0.2
STRN4-203ENST00000435164 PDHXO00330 501 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 ARHGAP6O43182 974 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 ZSCAN12O43309 604 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 ALDH1A1P00352 501 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 IKQ13123 557 aaPredicted RBP16.27■□□□□ 0.2
STRN4-203ENST00000435164 GPAT2Q6NUI2 795 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 CABP7Q86V35 215 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 IFNL1Q8IU54 200 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 KIF18AQ8NI77 898 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 BLZF1Q9H2G9 400 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 CPVLQ9H3G5 476 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 RIC8AQ9NPQ8 531 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 KBTBD4Q9NVX7 518 aa16.27■□□□□ 0.2
STRN4-203ENST00000435164 PARP14Q460N5 1801 aa16.27■□□□□ 0.19
STRN4-203ENST00000435164 RIOK3O14730 519 aaKnown RBP16.26■□□□□ 0.19
STRN4-203ENST00000435164 CD44P16070 742 aaKnown RBP16.26■□□□□ 0.19
STRN4-203ENST00000435164 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
STRN4-203ENST00000435164 CATSPERGQ6ZRH7 1159 aa16.26■□□□□ 0.19
STRN4-203ENST00000435164 ADGRF4Q8IZF3 695 aa16.26■□□□□ 0.19
STRN4-203ENST00000435164 CUL5Q93034 780 aa16.26■□□□□ 0.19
STRN4-203ENST00000435164 CALML4Q96GE6 196 aa16.26■□□□□ 0.19
STRN4-203ENST00000435164 MED15Q96RN5 788 aa16.26■□□□□ 0.19
STRN4-203ENST00000435164 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
STRN4-203ENST00000435164 PTPN18Q99952 460 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms