RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 AKR1B15C9JRZ8 316 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-209ENST00000433949 TXKP42681 527 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 TRIM14Q14142 442 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 HSP90AA2PQ14568 343 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-209ENST00000433949 COBLL1Q53SF7 1204 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 SLFN13Q68D06 897 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 TTBK2Q6IQ55 1244 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 CNGA4Q8IV77 575 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 ZNF592Q92610 1267 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 CCDC51Q96ER9 411 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 WDR90Q96KV7 1748 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 SCN4AP35499 1836 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 BICDL2A1A5D9 508 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 USP17L10C9JJH3 530 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 F5H6K3 240 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 SLC26A4O43511 780 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
CTCFL-209ENST00000433949 NF2P35240 595 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 KLRC3Q07444 240 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 TEX2Q8IWB9 1127 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 GMCL1Q96IK5 515 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 CDK5RAP3Q96JB5 506 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 FEZ1Q99689 392 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-209ENST00000433949 PICK1Q9NRD5 415 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 EXOC1Q9NV70 894 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 GDAQ9Y2T3 454 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 ZHX2Q9Y6X8 837 aa13.37□□□□□ -0.27
CTCFL-209ENST00000433949 KCNJ18B7U540 433 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 N4BP3O15049 544 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 PPP1R11O60927 126 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-209ENST00000433949 SLC16A2P36021 539 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 KCNJ12Q14500 433 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 KRT31Q15323 416 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 KRT79Q5XKE5 535 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 CNNM4Q6P4Q7 775 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 SV2BQ7L1I2 683 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 CLMNQ96JQ2 1002 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 TEX33O43247 280 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 USP11P51784 963 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 SPP2Q13103 211 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 VGLL4Q14135 290 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 QRICH1Q2TAL8 776 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 MOXD1Q6UVY6 613 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-209ENST00000433949 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 SCYL3Q8IZE3 742 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 MMTAG2Q9BU76 263 aaKnown RBP13.36□□□□□ -0.27
CTCFL-209ENST00000433949 DDX25Q9UHL0 483 aaKnown RBP13.36□□□□□ -0.27
CTCFL-209ENST00000433949 ZNF112Q9UJU3 913 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
CTCFL-209ENST00000433949 PVALEFA0A1B0GWK0 134 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 TDP2O95551 362 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 PTPRAP18433 802 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 COPB1P53618 953 aaKnown RBP13.35□□□□□ -0.27
CTCFL-209ENST00000433949 ETF1P62495 437 aaKnown RBP13.35□□□□□ -0.27
CTCFL-209ENST00000433949 TRAF1Q13077 416 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 CDC37Q16543 378 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-209ENST00000433949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.35□□□□□ -0.27
CTCFL-209ENST00000433949 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 PHLPP2Q6ZVD8 1323 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 SLC37A4O43826 429 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 NDUFB10O96000 172 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
CTCFL-209ENST00000433949 ADKP55263 362 aaKnown RBP13.35□□□□□ -0.27
CTCFL-209ENST00000433949 ASIC1P78348 528 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 PDE4DQ08499 809 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-209ENST00000433949 MTMR2Q13614 643 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 FAM114A1Q8IWE2 563 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 LARP4BQ92615 738 aaKnown RBP13.35□□□□□ -0.27
CTCFL-209ENST00000433949 PLIN2Q99541 437 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
CTCFL-209ENST00000433949 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
CTCFL-209ENST00000433949 CCNE1P24864 410 aa13.34□□□□□ -0.27
CTCFL-209ENST00000433949 UBE2SQ16763 222 aa13.34□□□□□ -0.27
CTCFL-209ENST00000433949 TRIM47Q96LD4 638 aa13.34□□□□□ -0.27
CTCFL-209ENST00000433949 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
CTCFL-209ENST00000433949 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-209ENST00000433949 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
CTCFL-209ENST00000433949 TMX2Q9Y320 296 aa13.34□□□□□ -0.27
CTCFL-209ENST00000433949 CSADQ9Y600 493 aa13.34□□□□□ -0.27
CTCFL-209ENST00000433949 EDIL3O43854 480 aa13.33□□□□□ -0.27
CTCFL-209ENST00000433949 MARCH6O60337 910 aa13.33□□□□□ -0.27
CTCFL-209ENST00000433949 MFAP3LO75121 409 aa13.33□□□□□ -0.27
CTCFL-209ENST00000433949 CELF2O95319 508 aaKnown RBP13.33□□□□□ -0.27
CTCFL-209ENST00000433949 FOSP01100 380 aaPredicted RBP13.33□□□□□ -0.27
CTCFL-209ENST00000433949 SNAP25P60880 206 aa13.33□□□□□ -0.27
CTCFL-209ENST00000433949 RBM10P98175 930 aaKnown RBP13.33□□□□□ -0.27
CTCFL-209ENST00000433949 GRB10Q13322 594 aa13.33□□□□□ -0.27
CTCFL-209ENST00000433949 SNX29Q8TEQ0 813 aa13.33□□□□□ -0.27
CTCFL-209ENST00000433949 LRRC15Q8TF66 581 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms