RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 DYMQ7RTS9 669 aa21.9■■□□□ 1.1
VRK2-205ENST00000432057 HPS3Q969F9 1004 aa21.9■■□□□ 1.1
VRK2-205ENST00000432057 CTAGE1Q96RT6 745 aa21.9■■□□□ 1.1
VRK2-205ENST00000432057 LIMA1Q9UHB6 759 aaKnown RBP21.9■■□□□ 1.1
VRK2-205ENST00000432057 COL11A1P12107 1806 aaPredicted RBP21.9■■□□□ 1.1
VRK2-205ENST00000432057 CIITAP33076 1130 aa21.9■■□□□ 1.1
VRK2-205ENST00000432057 HYIQ5T013 277 aa21.9■■□□□ 1.1
VRK2-205ENST00000432057 C16orf45Q96MC5 204 aaPredicted RBP21.9■■□□□ 1.1
VRK2-205ENST00000432057 POTEB3A0JP26 581 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 POTECB2RU33 542 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 KCNJ18B7U540 433 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 GCOM1H8Y6P7 765 aaPredicted RBP21.89■■□□□ 1.09
VRK2-205ENST00000432057 CTNND1O60716 968 aaKnown RBP21.89■■□□□ 1.09
VRK2-205ENST00000432057 CYP3A4P08684 503 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 POLR2MP0CAP2 368 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 KCNJ12Q14500 433 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 POTEBQ6S5H4 581 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 UNC13DQ70J99 1090 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 LDHDQ86WU2 507 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 MRPL11Q9Y3B7 192 aaKnown RBP21.89■■□□□ 1.09
VRK2-205ENST00000432057 ABCB11O95342 1321 aa21.89■■□□□ 1.09
VRK2-205ENST00000432057 TBX3O15119 743 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 WDR46O15213 610 aaKnown RBP21.88■■□□□ 1.09
VRK2-205ENST00000432057 SPAG1Q07617 926 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 SPIRE1Q08AE8 756 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 FILIP1LQ4L180 1135 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 TCP11X2Q5H9J9 407 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 CNNM4Q6P4Q7 775 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 KIAA0895Q8NCT3 520 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 CYP2W1Q8TAV3 490 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 DHTKD1Q96HY7 919 aaPredicted RBP21.88■■□□□ 1.09
VRK2-205ENST00000432057 TRIM47Q96LD4 638 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 NT5C3AQ9H0P0 336 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 H7C1D1 291 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 MSH4O15457 936 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 NRDCO43847 1150 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 ZNF76P36508 570 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 PBX1P40424 430 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 ANGEL2Q5VTE6 544 aaKnown RBP21.88■■□□□ 1.09
VRK2-205ENST00000432057 TTI2Q6NXR4 508 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 TRPM4Q8TD43 1214 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 KIAA1683Q9H0B3 1180 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 TAB2Q9NYJ8 693 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 KIAA1024Q9UPX6 916 aa21.88■■□□□ 1.09
VRK2-205ENST00000432057 E9PMD0 336 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 MED24O75448 989 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 COPB1P53618 953 aaKnown RBP21.87■■□□□ 1.09
VRK2-205ENST00000432057 NCAPH2Q6IBW4 605 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 IRF2BP1Q8IU81 584 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 CCAR2Q8N163 923 aaKnown RBP21.87■■□□□ 1.09
VRK2-205ENST00000432057 DDX12PQ92771 950 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 AGBL1Q96MI9 1066 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 SLF1Q9BQI6 1058 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 SLC39A2Q9NP94 309 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 GINM1Q9NU53 330 aa21.87■■□□□ 1.09
VRK2-205ENST00000432057 PVALEFA0A1B0GWK0 134 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 CCNE1P24864 410 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 UBXN2AP68543 259 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 ILDR2Q71H61 639 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 TEX2Q8IWB9 1127 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 CCDC112Q8NEF3 446 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 LPAR1Q92633 364 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 P2RX5Q93086 422 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 LRRC27Q9C0I9 530 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 VPS16Q9H269 839 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 TRMT1Q9NXH9 659 aaKnown RBP21.86■■□□□ 1.09
VRK2-205ENST00000432057 ZNF536O15090 1300 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 RLFQ13129 1914 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 IGLV3-22A0A075B6J6 115 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 SSBP05455 408 aaKnown RBP eCLIP21.86■■□□□ 1.09
VRK2-205ENST00000432057 IDEP14735 1019 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 MTMR2Q13614 643 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 PRAMEF18Q5VWM3 479 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 DCAF15Q66K64 600 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 CREBRFQ8IUR6 639 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 TC2NQ8N9U0 490 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 ANKRD20A12PQ8NF67 263 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 FAM20AQ96MK3 541 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 DUSP9Q99956 384 aaKnown RBP21.86■■□□□ 1.09
VRK2-205ENST00000432057 WDR18Q9BV38 432 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 GTPBP4Q9BZE4 634 aaKnown RBP21.86■■□□□ 1.09
VRK2-205ENST00000432057 TMX1Q9H3N1 280 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 CCPG1Q9ULG6 757 aa21.86■■□□□ 1.09
VRK2-205ENST00000432057 WDR90Q96KV7 1748 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 POTEFA5A3E0 1075 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 SLC26A4O43511 780 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 ICAM1P05362 532 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 POTEIP0CG38 1075 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 TERF1P54274 439 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 ADKP55263 362 aaKnown RBP21.85■■□□□ 1.09
VRK2-205ENST00000432057 COBLL1Q53SF7 1204 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 E4F1Q66K89 784 aaPredicted RBP21.85■■□□□ 1.09
VRK2-205ENST00000432057 POTEGQ6S5H5 508 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 POTEEQ6S8J3 1075 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 APOBEC3FQ8IUX4 373 aaKnown RBP21.85■■□□□ 1.09
VRK2-205ENST00000432057 TMEM139Q8IV31 216 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 HOOK2Q96ED9 719 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 SRRTQ9BXP5 876 aaKnown RBP21.85■■□□□ 1.09
VRK2-205ENST00000432057 TANGO6Q9C0B7 1094 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 THAP9Q9H5L6 903 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms