RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 BZW1Q7L1Q6 419 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-209ENST00000429836 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
SEMA4D-209ENST00000429836 MAB21L3Q8N8X9 362 aa12.22□□□□□ -0.45
SEMA4D-209ENST00000429836 PARD3BQ8TEW8 1205 aa12.22□□□□□ -0.45
SEMA4D-209ENST00000429836 LRRC15Q8TF66 581 aa12.22□□□□□ -0.45
SEMA4D-209ENST00000429836 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
SEMA4D-209ENST00000429836 C5orf60A6NFR6 353 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 DISP2A7MBM2 1401 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 ECHS1P30084 290 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 RIC1Q4ADV7 1423 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 CCDC178Q5BJE1 867 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 RCSD1Q6JBY9 416 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 PROSER2Q86WR7 435 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 GIMAP8Q8ND71 665 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 C1orf131Q8NDD1 294 aaKnown RBP12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 P2RX5Q93086 422 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 DISC1Q9NRI5 854 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 MYH2Q9UKX2 1941 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 A0A1W2PQJ5 194 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 FCER1AP12319 257 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 TDRD12Q587J7 1177 aaKnown RBP12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 MIGA1Q8NAN2 632 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 HELBQ8NG08 1087 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 ZBTB10Q96DT7 871 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 HOOK2Q96ED9 719 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 ERGIC2Q96RQ1 377 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 FBXL5Q9UKA1 691 aa12.21□□□□□ -0.45
SEMA4D-209ENST00000429836 ABCC12Q96J65 1359 aa12.21□□□□□ -0.46
SEMA4D-209ENST00000429836 SNAP23O00161 211 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 TRIM37O94972 964 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 STK4Q13043 487 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 FAM133BQ5BKY9 247 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 CCDC63Q8NA47 563 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 KDM4CQ9H3R0 1056 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 PANK4Q9NVE7 773 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 TRPC6Q9Y210 931 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 C15orf41Q9Y2V0 281 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 ADAMTS7Q9UKP4 1686 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 STRCQ7RTU9 1775 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 CCT8L1PA6NM43 557 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 PRPF3O43395 683 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 UPP2O95045 317 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 CABP4P57796 275 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 LRIG3Q6UXM1 1119 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 CCDC155Q8N6L0 562 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 MICAL1Q8TDZ2 1067 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 ZNF570Q96NI8 536 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 GOLPH3Q9H4A6 298 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 EBF2Q9HAK2 575 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 CNNM1Q9NRU3 951 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 PJA2O43164 708 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 AP1G2O75843 785 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 RHOBTB3O94955 611 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 LCA5LO95447 670 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 ITGA6P23229 1130 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 CCNE1P24864 410 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 HNRNPH3P31942 346 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 NLRP5P59047 1200 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 PDE4DQ08499 809 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 ENOX2Q16206 610 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 CDCA2Q69YH5 1023 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 C3orf20Q8ND61 904 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 RASGRP4Q8TDF6 673 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 AGAP11Q8TF27 550 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 INPP4AQ96PE3 977 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 SPATS2LQ9NUQ6 558 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 SIK3Q9Y2K2 1263 aa12.2□□□□□ -0.46
SEMA4D-209ENST00000429836 IRF6O14896 467 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 CYP27B1O15528 508 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 ORC4O43929 436 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 SEC23AQ15436 765 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 NBPF9Q3BBW0 867 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 KRT71Q3SY84 523 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 IFNL2Q8IZJ0 200 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 ENAHQ8N8S7 591 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 SPAG5Q96R06 1193 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 PYM1Q9BRP8 204 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 AP1M1Q9BXS5 423 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 NLRC4Q9NPP4 1024 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 GGT7Q9UJ14 662 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 DIAPH2O60879 1101 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 KLRC1P26715 233 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 CAPRIN2Q6IMN6 1127 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 FAM43BQ6ZT52 329 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 ZSCAN29Q8IWY8 852 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 ISCUQ9H1K1 167 aa12.19□□□□□ -0.46
SEMA4D-209ENST00000429836 CTNND1O60716 968 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 GHRP10912 638 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 TNNC1P63316 161 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 BIRC3Q13489 604 aa12.18□□□□□ -0.46
SEMA4D-209ENST00000429836 RUFY4Q6ZNE9 571 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms