RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 DPPA5A6NC42 116 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 BHMG1C9JSJ3 638 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-206ENST00000428313 ALDH3A1P30838 453 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 MAGEA8P43361 318 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 NLRP6P59044 892 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 NCALDP61601 193 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 NR5A1Q13285 461 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 ERICH1Q86X53 443 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 OR2W6PQ8NHA6 318 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 TEKT4Q8WW24 435 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 BLZF1Q9H2G9 400 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 LMCD1Q9NZU5 365 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 RAD51CO43502 376 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 EVI5O60447 810 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 DEXIO95424 95 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 RPN1P04843 607 aaKnown RBP17.68■□□□□ 0.42
C9orf3-206ENST00000428313 SETSIPP0DME0 302 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 MYD88Q99836 296 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 CABP5Q9NP86 173 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 SAMD15Q9P1V8 674 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 PHRF1Q9P1Y6 1649 aaKnown RBP17.68■□□□□ 0.42
C9orf3-206ENST00000428313 LMTK3Q96Q04 1460 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 CTNND1O60716 968 aaKnown RBP17.68■□□□□ 0.42
C9orf3-206ENST00000428313 KIF4AO95239 1232 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 GUCY1A2P33402 732 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 PDE6BP35913 854 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 KCNJ2P63252 427 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 MXRA7P84157 204 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 CUL3Q13618 768 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 ATG9AQ7Z3C6 839 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 RBM12BQ8IXT5 1001 aaKnown RBP17.68■□□□□ 0.42
C9orf3-206ENST00000428313 LMNTD2Q8IXW0 634 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 ERGIC2Q96RQ1 377 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 FAM167BQ9BTA0 163 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 WDR35Q9P2L0 1181 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 AGAP1Q9UPQ3 857 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 LRRC42Q9Y546 428 aa17.68■□□□□ 0.42
C9orf3-206ENST00000428313 SIPA1L3O60292 1781 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-206ENST00000428313 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 RARAP10276 462 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 LACTBP83111 547 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-206ENST00000428313 HLTFQ14527 1009 aaKnown RBP eCLIP17.67■□□□□ 0.42
C9orf3-206ENST00000428313 TBC1D10CQ8IV04 446 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 GBP7Q8N8V2 638 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-206ENST00000428313 TUBGCP2Q9BSJ2 902 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 ARHGAP20Q9P2F6 1191 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 TMEM59LQ9UK28 342 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 E7ENQ6 273 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 ERVK-9P63128 1117 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 ATP11AP98196 1134 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 MAP3K12Q12852 859 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 FAM133BQ5BKY9 247 aaKnown RBP17.67■□□□□ 0.42
C9orf3-206ENST00000428313 GIGYF2Q6Y7W6 1299 aaKnown RBP17.67■□□□□ 0.42
C9orf3-206ENST00000428313 ATL2Q8NHH9 583 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 INPP4AQ96PE3 977 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-206ENST00000428313 NSRP1Q9H0G5 558 aaKnown RBP17.67■□□□□ 0.42
C9orf3-206ENST00000428313 CCDC134Q9H6E4 229 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 SLC12A7Q9Y666 1083 aa17.67■□□□□ 0.42
C9orf3-206ENST00000428313 LRP6O75581 1613 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 SLIT3O75094 1523 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 IL15P40933 162 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-206ENST00000428313 MAGEA1P43355 309 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 TIMM10P62072 90 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 TRADDQ15628 312 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 SPDYCQ5MJ68 293 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 ANO7Q6IWH7 933 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 APBB1IPQ7Z5R6 666 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-206ENST00000428313 SPICE1Q8N0Z3 855 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 STAMQ92783 540 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 IFT74Q96LB3 600 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 GDAQ9Y2T3 454 aa17.66■□□□□ 0.42
C9orf3-206ENST00000428313 TRIM49BA6NDI0 452 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 IGF2BP3O00425 579 aaKnown RBP eCLIP17.65■□□□□ 0.42
C9orf3-206ENST00000428313 CES2O00748 559 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 GPAA1O43292 621 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 PLEKP08567 350 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-206ENST00000428313 EIF3BP55884 814 aaKnown RBP17.65■□□□□ 0.42
C9orf3-206ENST00000428313 DYNC1I2Q13409 638 aaKnown RBP17.65■□□□□ 0.42
C9orf3-206ENST00000428313 GALNTL6Q49A17 601 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 TMEM67Q5HYA8 995 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 NUGGCQ68CJ6 796 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 OXER1Q8TDS5 423 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 RBM41Q96IZ5 413 aaKnown RBP17.65■□□□□ 0.42
C9orf3-206ENST00000428313 MTRQ99707 1265 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 RAB17Q9H0T7 212 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 ECT2Q9H8V3 914 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 ARHGEF3Q9NR81 526 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 ADAM22Q9P0K1 906 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 CTNNAL1Q9UBT7 734 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 LTN1O94822 1766 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 PXDNQ92626 1479 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 RNMTO43148 476 aaKnown RBP17.65■□□□□ 0.42
C9orf3-206ENST00000428313 AKR1B10O60218 316 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 EIF4A3P38919 411 aaKnown RBP17.65■□□□□ 0.42
C9orf3-206ENST00000428313 KRT71Q3SY84 523 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 PPP1R15BQ5SWA1 713 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 TYW1BQ6NUM6 668 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 NCAPG2Q86XI2 1143 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 ZSCAN29Q8IWY8 852 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-206ENST00000428313 USHBP1Q8N6Y0 703 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms