RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 CEP135Q66GS9 1140 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 TMX1Q9H3N1 280 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 SH2D4AQ9H788 454 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 HACL1Q9UJ83 578 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 POTEB3A0JP26 581 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 POTECB2RU33 542 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 RPS12P25398 132 aaKnown RBP11.64□□□□□ -0.55
HDAC9-210ENST00000428307 INPP5BP32019 993 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 MMP14P50281 582 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 RBL2Q08999 1139 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 TMEM119Q4V9L6 283 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 ANKRD40Q6AI12 368 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 POTEBQ6S5H4 581 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 SLFN12Q8IYM2 578 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 CSGALNACT2Q8N6G5 542 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 KIAA0895Q8NCT3 520 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 ANKRD20A12PQ8NF67 263 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 LENG9Q96B70 501 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 PRIMPOLQ96LW4 560 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 BAG1Q99933 345 aaPredicted RBP11.64□□□□□ -0.55
HDAC9-210ENST00000428307 LIMA1Q9UHB6 759 aaKnown RBP11.64□□□□□ -0.55
HDAC9-210ENST00000428307 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
HDAC9-210ENST00000428307 COPB1P53618 953 aaKnown RBP11.63□□□□□ -0.55
HDAC9-210ENST00000428307 SPAG1Q07617 926 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 RAD51AP2Q09MP3 1159 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 NBPF12Q5TAG4 269 aaPredicted RBP11.63□□□□□ -0.55
HDAC9-210ENST00000428307 NCAPH2Q6IBW4 605 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 TTI2Q6NXR4 508 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 CNNM4Q6P4Q7 775 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 SLC30A10Q6XR72 485 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 CCDC112Q8NEF3 446 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 ETNPPLQ8TBG4 499 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 DHTKD1Q96HY7 919 aaPredicted RBP11.63□□□□□ -0.55
HDAC9-210ENST00000428307 MBOAT7Q96N66 472 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 RANBP17Q9H2T7 1088 aaKnown RBP11.63□□□□□ -0.55
HDAC9-210ENST00000428307 GCOM1H8Y6P7 765 aaPredicted RBP11.63□□□□□ -0.55
HDAC9-210ENST00000428307 FZD9O00144 591 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 TPM2P07951 284 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 POLR2MP0CAP2 368 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 PBX1P40424 430 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 PTGER2P43116 358 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 UNC13DQ70J99 1090 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 PPFIBP1Q86W92 1011 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 LDHDQ86WU2 507 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 GLIS3Q8NEA6 775 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 TSC1Q92574 1164 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 P2RX5Q93086 422 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 PPP1R13BQ96KQ4 1090 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 AGBL1Q96MI9 1066 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 FEM1BQ9UK73 627 aa11.63□□□□□ -0.55
HDAC9-210ENST00000428307 PSME4Q14997 1843 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 POTEFA5A3E0 1075 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 AKR1B15C9JRZ8 316 aaPredicted RBP11.62□□□□□ -0.55
HDAC9-210ENST00000428307 PIK3CDO00329 1044 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 MEIS1O00470 390 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 MSH4O15457 936 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 MED24O75448 989 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
HDAC9-210ENST00000428307 UBXN1Q04323 297 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 LRRC41Q15345 812 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 Q4G0T1 1027 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 POTEGQ6S5H5 508 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 POTEEQ6S8J3 1075 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 MOXD1Q6UVY6 613 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 NYAP1Q6ZVC0 841 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 FAM160B2Q86V87 743 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 CATSPER3Q86XQ3 398 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 TMEM139Q8IV31 216 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 CPXCR1Q8N123 301 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 DUSP9Q99956 384 aaKnown RBP11.62□□□□□ -0.55
HDAC9-210ENST00000428307 ZNF541Q9H0D2 1346 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 PVALEFA0A1B0GWK0 134 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
HDAC9-210ENST00000428307 CCNE1P24864 410 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 CASP14P31944 242 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 SPIRE1Q08AE8 756 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 TRAF1Q13077 416 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 SEMA3FQ13275 785 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 KIF4BQ2VIQ3 1234 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 MYRIPQ8NFW9 859 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 SEMA6BQ9H3T3 888 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 TBC1D7Q9P0N9 293 aa11.62□□□□□ -0.55
HDAC9-210ENST00000428307 MRPL11Q9Y3B7 192 aaKnown RBP11.62□□□□□ -0.55
HDAC9-210ENST00000428307 MYH7BA7E2Y1 1941 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 NPHP3-ACAD11A0A0J9YXS1 232 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 PLA2G4BP0C869 781 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
HDAC9-210ENST00000428307 CIITAP33076 1130 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 PSMC6P62333 389 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 CYP4A11Q02928 519 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 DNAJC19Q96DA6 116 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 BMP2KQ9NSY1 1161 aaPredicted RBP11.61□□□□□ -0.55
HDAC9-210ENST00000428307 MAGEC2Q9UBF1 373 aaPredicted RBP11.61□□□□□ -0.55
HDAC9-210ENST00000428307 KDM3AQ9Y4C1 1321 aa11.61□□□□□ -0.55
HDAC9-210ENST00000428307 BICDL2A1A5D9 508 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms