RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 TSPY2A6NKD2 308 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
RDH11-202ENST00000428130 SLC3A2P08195 630 aaKnown RBP12.16□□□□□ -0.46
RDH11-202ENST00000428130 MMP3P08254 477 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 SLC16A2P36021 539 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 NOVP48745 357 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 RPS6P62753 249 aaKnown RBP12.16□□□□□ -0.46
RDH11-202ENST00000428130 IKBKEQ14164 716 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 CCDC96Q2M329 555 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 TRAF7Q6Q0C0 670 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 HFE2Q6ZVN8 426 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 DNERQ8NFT8 737 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 DCAF4Q8WV16 495 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 ANKS1AQ92625 1134 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 KAT2BQ92831 832 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
RDH11-202ENST00000428130 MPHOSPH6Q99547 160 aaKnown RBP12.16□□□□□ -0.46
RDH11-202ENST00000428130 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 NAPBQ9H115 298 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 PRKAG3Q9UGI9 489 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 GTF2IRD1Q9UHL9 959 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 INSL6Q9Y581 213 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 MYO7AQ13402 2215 aa12.16□□□□□ -0.46
RDH11-202ENST00000428130 HTRA4P83105 476 aaPredicted RBP12.15□□□□□ -0.46
RDH11-202ENST00000428130 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
RDH11-202ENST00000428130 MBTPS1Q14703 1052 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 COL19A1Q14993 1142 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 SYDE2Q5VT97 1194 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 CCDC62Q6P9F0 684 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.465e-10■■□□□ 13.9
RDH11-202ENST00000428130 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
RDH11-202ENST00000428130 AFG1LQ8WV93 481 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 PABPC5Q96DU9 382 aaKnown RBP12.15□□□□□ -0.46
RDH11-202ENST00000428130 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 INCENPQ9NQS7 918 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 CTNNA3Q9UI47 895 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 DDX19BQ9UMR2 479 aa12.15□□□□□ -0.46
RDH11-202ENST00000428130 IRS1P35568 1242 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 ARHGAP1Q07960 439 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 PTPROQ16827 1216 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 TRIM71Q2Q1W2 868 aaKnown RBP12.14□□□□□ -0.47
RDH11-202ENST00000428130 EPC2Q52LR7 807 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 TIGD5Q53EQ6 642 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 TSHZ3Q63HK5 1081 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 ADHFE1Q8IWW8 467 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 WNT8BQ93098 351 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 HDAC6Q9UBN7 1215 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 FAM50BQ9Y247 325 aa12.14□□□□□ -0.47
RDH11-202ENST00000428130 H3BNC9 293 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 FOXP2O15409 715 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 LGR5O75473 907 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 GH1P01241 217 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 MS4A1P11836 297 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 CASTP20810 708 aaKnown RBP12.13□□□□□ -0.47
RDH11-202ENST00000428130 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 PTK7Q13308 1070 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 TCEAL5Q5H9L2 206 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 ZNF618Q5T7W0 954 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 SAMD11Q96NU1 681 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 DMDP11532 3685 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 KIAA1671Q9BY89 1806 aa12.13□□□□□ -0.47
RDH11-202ENST00000428130 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
RDH11-202ENST00000428130 WDR19Q8NEZ3 1342 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 B4DLN1 442 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 AMHP03971 560 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 LTBRP36941 435 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 PSEN2P49810 448 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 MRPL12P52815 198 aaKnown RBP12.12□□□□□ -0.47
RDH11-202ENST00000428130 GPM6BQ13491 265 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 CHST3Q7LGC8 479 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 MYOCDQ8IZQ8 938 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 C7orf31Q8N865 590 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 MFSD14AQ96MC6 490 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 ALG1Q9BT22 464 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 NSUN3Q9H649 340 aaKnown RBP12.12□□□□□ -0.47
RDH11-202ENST00000428130 GPCPD1Q9NPB8 672 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
RDH11-202ENST00000428130 DOCK5Q9H7D0 1870 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 HAS3O00219 553 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
RDH11-202ENST00000428130 F2P00734 622 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 DGKDQ16760 1214 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
RDH11-202ENST00000428130 EP400NLQ6ZTU2 488 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 DBF4BQ8NFT6 615 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 TMEM47Q9BQJ4 181 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 KATNAL1Q9BW62 490 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
RDH11-202ENST00000428130 CLDND1Q9NY35 253 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 MUTYHQ9UIF7 546 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
RDH11-202ENST00000428130 ORC4O43929 436 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 ZNF286BP0CG31 522 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 PDHBP11177 359 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms