RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 hCG_2014768A0A024R1R8 64 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 ANKRD65E5RJM6 399 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 HEXIM1O94992 359 aaKnown RBP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 CASP14P31944 242 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 ADALQ6DHV7 355 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 HIBCHQ6NVY1 386 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 EFCAB13Q8IY85 973 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 PPP1R13BQ96KQ4 1090 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 PCDHB4Q9Y5E5 795 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 QRICH2Q9H0J4 1663 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 VWDEQ8N2E2 1590 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 GOLGA8CPA6NN73 597 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 GOLGA8HP0CJ92 632 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 GPKOWQ92917 476 aaPredicted RBP eCLIP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 FAM193BQ96PV7 902 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 DNAJC17Q9NVM6 304 aaKnown RBP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 TRPC5Q9UL62 973 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 PACSIN2Q9UNF0 486 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 LRRIQ4A6NIV6 560 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 BASP1P80723 227 aaKnown RBP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 C16orf87Q6PH81 154 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 NRBF2Q96F24 287 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 GOLGA8QA0A0J9YX86 632 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 GOLGA8OA6NCC3 632 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 GOLGA8NF8WBI6 632 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-214ENST00000427183 USP28Q96RU2 1077 aa13.61□□□□□ -0.23
HDLBP-214ENST00000427183 TNRQ92752 1358 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 RPN1P04843 607 aaKnown RBP13.6□□□□□ -0.23
HDLBP-214ENST00000427183 ALAS1P13196 640 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 HLA-DPA1P20036 260 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 EDC3Q96F86 508 aaKnown RBP13.6□□□□□ -0.23
HDLBP-214ENST00000427183 SKIP12755 728 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 CYP4A11Q02928 519 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 CCDC85BQ15834 202 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-214ENST00000427183 SPATA5Q8NB90 893 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 GLI2P10070 1586 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 GOLGA8SH3BPF8 625 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 SMCR8Q8TEV9 937 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-214ENST00000427183 RAPGEF5Q92565 580 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 IQCDQ96DY2 449 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 SPC25Q9HBM1 224 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 DAAM1Q9Y4D1 1078 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 H0Y3Z8 333 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 PDE6AP16499 860 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 TRAPPC10P48553 1259 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 TSC22D3Q99576 134 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 WARS2Q9UGM6 360 aaKnown RBP13.6□□□□□ -0.23
HDLBP-214ENST00000427183 MYO1FO00160 1098 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 MT-ND3P03897 115 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 SGO2Q562F6 1265 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 ATG16L1Q676U5 607 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 TBC1D1Q86TI0 1168 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-214ENST00000427183 TEKT2Q9UIF3 430 aa13.6□□□□□ -0.23
HDLBP-214ENST00000427183 NOVA2Q9UNW9 492 aaKnown RBP13.6□□□□□ -0.23
HDLBP-214ENST00000427183 ESRRAP11474 423 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 EXOC3L4Q17RC7 722 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 TRIM67Q6ZTA4 783 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 PCGF5Q86SE9 256 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 CHAMP1Q96JM3 812 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 TLK1Q9UKI8 766 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 POLR2BP30876 1174 aaKnown RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 HDLBPQ00341 1268 aaKnown RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 MYL7Q01449 175 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 SLC7A5Q01650 507 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 FLOT2Q14254 428 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 SZRD1Q7Z422 152 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 ZC3H18Q86VM9 953 aaKnown RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 TRAIPQ9BWF2 469 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 MAP3K5Q99683 1374 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 NDUFA8P51970 172 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 OCRLQ01968 901 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 YWHAHQ04917 246 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 ZNF654Q8IZM8 581 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 BLIDQ8IZY5 108 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 FAM149B1Q96BN6 582 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 LZTS2Q9BRK4 669 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 ADPGKQ9BRR6 497 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 PSTPIP2Q9H939 334 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 ANGPTL2Q9UKU9 493 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 ITM2BQ9Y287 266 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 MAN1A2O60476 641 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 FTCDO95954 541 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 MAPK4P31152 587 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 THOC5Q13769 683 aaKnown RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 ZC3H12BQ5HYM0 836 aaKnown RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 KBTBD3Q8NAB2 608 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 DNAJC6O75061 913 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 LRRN2O75325 713 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 TADA3O75528 432 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 NNTQ13423 1086 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 GLE1Q53GS7 698 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms