RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 C7orf31Q8N865 590 aa18.89■□□□□ 0.61
PUDP-203ENST00000424830 FAM227BQ96M60 508 aa18.89■□□□□ 0.61
PUDP-203ENST00000424830 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.61
PUDP-203ENST00000424830 RAD9AQ99638 391 aa18.89■□□□□ 0.61
PUDP-203ENST00000424830 KATNAL1Q9BW62 490 aa18.89■□□□□ 0.61
PUDP-203ENST00000424830 RNF41Q9H4P4 317 aaPredicted RBP18.89■□□□□ 0.61
PUDP-203ENST00000424830 GTF2IRD1Q9UHL9 959 aa18.89■□□□□ 0.61
PUDP-203ENST00000424830 A0A0D9SFI3 127 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 GJB5O95377 273 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 CXCL10P02778 98 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 GOLGA8HP0CJ92 632 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
PUDP-203ENST00000424830 DEFB103AP81534 67 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 CDC37Q16543 378 aaPredicted RBP18.88■□□□□ 0.61
PUDP-203ENST00000424830 TICAM2Q86XR7 235 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 MCF2L2Q86YR7 1114 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 ESR2Q92731 530 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 KAT2BQ92831 832 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 TGS1Q96RS0 853 aaKnown RBP18.88■□□□□ 0.61
PUDP-203ENST00000424830 IWS1Q96ST2 819 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 CRBNQ96SW2 442 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 MTUS1Q9ULD2 1270 aa18.88■□□□□ 0.61
PUDP-203ENST00000424830 SIP14410 1827 aa18.87■□□□□ 0.61
PUDP-203ENST00000424830 CKBP12277 381 aa18.87■□□□□ 0.61
PUDP-203ENST00000424830 IKBKEQ14164 716 aa18.87■□□□□ 0.61
PUDP-203ENST00000424830 GPNMBQ14956 572 aa18.87■□□□□ 0.61
PUDP-203ENST00000424830 ANKRD45Q5TZF3 282 aa18.87■□□□□ 0.61
PUDP-203ENST00000424830 SYTL5Q8TDW5 730 aaPredicted RBP18.87■□□□□ 0.61
PUDP-203ENST00000424830 DHX38Q92620 1227 aaKnown RBP18.87■□□□□ 0.61
PUDP-203ENST00000424830 RMDN3Q96TC7 470 aa18.87■□□□□ 0.61
PUDP-203ENST00000424830 UBA5Q9GZZ9 404 aa18.87■□□□□ 0.61
PUDP-203ENST00000424830 MYH6P13533 1939 aa18.87■□□□□ 0.61
PUDP-203ENST00000424830 CCDC171Q6TFL3 1326 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 NBNO60934 754 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 ERVK-21P61565 698 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 ARHGEF16Q5VV41 709 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 DGKHQ86XP1 1220 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 EMID1Q96A84 441 aaPredicted RBP18.86■□□□□ 0.61
PUDP-203ENST00000424830 TAAR1Q96RJ0 339 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 CPVLQ9H3G5 476 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 SUGCTQ9HAC7 445 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 HDAC6Q9UBN7 1215 aa18.86■□□□□ 0.61
PUDP-203ENST00000424830 LINC01553A4QN01 128 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 GPR37L1O60883 481 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 PSEN2P49810 448 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 NT5C2P49902 561 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 PDE1AP54750 535 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 PTK7Q13308 1070 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 ZNF589Q86UQ0 364 aaPredicted RBP18.85■□□□□ 0.61
PUDP-203ENST00000424830 IQCA1Q86XH1 822 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 TBC1D10CQ8IV04 446 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 ZKSCAN3Q9BRR0 538 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 ALG1Q9BT22 464 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 UBE2ZQ9H832 354 aaPredicted RBP18.85■□□□□ 0.61
PUDP-203ENST00000424830 DDX41Q9UJV9 622 aaKnown RBP18.85■□□□□ 0.61
PUDP-203ENST00000424830 MRVI1Q9Y6F6 885 aa18.85■□□□□ 0.61
PUDP-203ENST00000424830 PIEZO1Q92508 2521 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 DHX16O60231 1041 aaKnown RBP18.84■□□□□ 0.61
PUDP-203ENST00000424830 EIF3JO75822 258 aaKnown RBP18.84■□□□□ 0.61
PUDP-203ENST00000424830 F2P00734 622 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 MFAP1P55081 439 aaKnown RBP18.84■□□□□ 0.61
PUDP-203ENST00000424830 NMIQ13287 307 aaPredicted RBP18.84■□□□□ 0.61
PUDP-203ENST00000424830 LAMC2Q13753 1193 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 MFSD10Q14728 455 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 KIAA0753Q2KHM9 967 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 CCDC178Q5BJE1 867 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 PNMA1Q8ND90 353 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 PPTC7Q8NI37 304 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 KAT14Q9H8E8 782 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 COL20A1Q9P218 1284 aa18.84■□□□□ 0.61
PUDP-203ENST00000424830 MRPL11Q9Y3B7 192 aaKnown RBP18.84■□□□□ 0.61
PUDP-203ENST00000424830 NEDD4P46934 1319 aa18.83■□□□□ 0.61
PUDP-203ENST00000424830 EMSYQ7Z589 1322 aa18.83■□□□□ 0.61
PUDP-203ENST00000424830 ZNF286BP0CG31 522 aa18.83■□□□□ 0.61
PUDP-203ENST00000424830 EIF2AK2P19525 551 aaKnown RBP18.83■□□□□ 0.61
PUDP-203ENST00000424830 ASPRV1Q53RT3 343 aa18.83■□□□□ 0.61
PUDP-203ENST00000424830 FAM117BQ6P1L5 589 aa18.83■□□□□ 0.61
PUDP-203ENST00000424830 DHX37Q8IY37 1157 aaKnown RBP18.83■□□□□ 0.61
PUDP-203ENST00000424830 ADGRF4Q8IZF3 695 aa18.83■□□□□ 0.61
PUDP-203ENST00000424830 KHSRPQ92945 711 aaKnown RBP eCLIP18.83■□□□□ 0.61
PUDP-203ENST00000424830 INSL6Q9Y581 213 aa18.83■□□□□ 0.61
PUDP-203ENST00000424830 SUPT16HQ9Y5B9 1047 aaKnown RBP18.83■□□□□ 0.61
PUDP-203ENST00000424830 MYH7BA7E2Y1 1941 aa18.83■□□□□ 0.6
PUDP-203ENST00000424830 MUC6Q6W4X9 2439 aa18.83■□□□□ 0.6
PUDP-203ENST00000424830 FAM86C2PA6NEL3 165 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 TRIM6-TRIM34B2RNG4 842 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 PI4K2BG5E9Z4 385 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 ZNF213O14771 459 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 LGR5O75473 907 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 QRICH1Q2TAL8 776 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 ZNF618Q5T7W0 954 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 FBXO11Q86XK2 927 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 C11orf16Q9NQ32 467 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 LAMA4Q16363 1823 aa18.82■□□□□ 0.6
PUDP-203ENST00000424830 HAS3O00219 553 aa18.81■□□□□ 0.6
PUDP-203ENST00000424830 AMHP03971 560 aa18.81■□□□□ 0.6
PUDP-203ENST00000424830 NEFLP07196 543 aa18.81■□□□□ 0.6
PUDP-203ENST00000424830 NR3C2P08235 984 aa18.81■□□□□ 0.6
PUDP-203ENST00000424830 KCNA5P22460 613 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms