RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 LRRC41Q15345 812 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 SLC14A2Q15849 920 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 DDR2Q16832 855 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 NXNQ6DKJ4 435 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 TTLL5Q6EMB2 1281 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 CCDC81Q6ZN84 652 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 RUFY4Q6ZNE9 571 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 CEP128Q6ZU80 1094 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 NLRX1Q86UT6 975 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 THNSL2Q86YJ6 484 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 SPICE1Q8N0Z3 855 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 CPXCR1Q8N123 301 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 ANAPC16Q96DE5 110 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 FCRL2Q96LA5 508 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-205ENST00000424674 SLC6A18Q96N87 628 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 NEUROD6Q96NK8 337 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 PRDM14Q9GZV8 571 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 PPCSQ9HAB8 311 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 IFT122Q9HBG6 1241 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 GINM1Q9NU53 330 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 ZIM2Q9NZV7 527 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 FBXO2Q9UK22 296 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-205ENST00000424674 NOL7Q9UMY1 257 aaKnown RBP4.56□□□□□ -1.68
SF3B1-205ENST00000424674 GTF2A1LQ9UNN4 478 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 NUB1Q9Y5A7 615 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 PPP2R3BQ9Y5P8 575 aa4.56□□□□□ -1.68
SF3B1-205ENST00000424674 TEX51A0A1B0GUA7 166 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 OR14I1A6ND48 311 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 NOTOA8MTQ0 251 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 NUAK1O60285 661 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 TCEA3O75764 348 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 CPEP16870 476 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 POU3F3P20264 500 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-205ENST00000424674 ENDOUP21128 410 aaKnown RBP4.55□□□□□ -1.68
SF3B1-205ENST00000424674 DLG4P78352 724 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 GFOD2Q3B7J2 385 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 TM4SF20Q53R12 229 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 ADGRF1Q5T601 910 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 SIRT2Q8IXJ6 389 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 TMEM192Q8IY95 271 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 TCEAL8Q8IYN2 117 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 JMYQ8N9B5 988 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 HHIPL1Q96JK4 782 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 CAMKK2Q96RR4 588 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 ZNF552Q9H707 407 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-205ENST00000424674 CHST7Q9NS84 486 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 FAM86C1Q9NVL1 165 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 TAGLN3Q9UI15 199 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 ASAP1Q9ULH1 1129 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 PCDHB12Q9Y5F1 795 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 CD2APQ9Y5K6 639 aa4.55□□□□□ -1.68
SF3B1-205ENST00000424674 MEIS1O00470 390 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 SMAD7O15105 426 aaKnown RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 SLC26A4O43511 780 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 RNASEH2AO75792 299 aaKnown RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 EFEMP2O95967 443 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 NBPF7P0C2Y1 421 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 MYCLP1P12525 358 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 PPM1FP49593 454 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 RAB27AP51159 221 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 GUCY2FP51841 1108 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 PICALMQ13492 652 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 PIN1Q13526 163 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 MLC1Q15049 377 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 MTERF2Q49AM1 385 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 ANO1Q5XXA6 986 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 TMEM132EQ6IEE7 984 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 CASC1Q6TDU7 716 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 ZPBP2Q6X784 338 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 AMIGO3Q86WK7 504 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 DGKHQ86XP1 1220 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 NIM1KQ8IY84 436 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 ENAHQ8N8S7 591 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 ATL2Q8NHH9 583 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 NINJ1Q92982 152 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 SLC9A7Q96T83 725 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 FAM126AQ9BYI3 521 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 CDH19Q9H159 772 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 CRTAC1Q9NQ79 661 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 GFOD1Q9NXC2 390 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 ACTR10Q9NZ32 417 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 PRR13Q9NZ81 148 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 FBXL21Q9UKT6 434 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 ZNRF3Q9ULT6 936 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 MINPP1Q9UNW1 487 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 GPR55Q9Y2T6 319 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-205ENST00000424674 RABGAP1Q9Y3P9 1069 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 PTCH2Q9Y6C5 1203 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 ADAMTS20P59510 1910 aa4.54□□□□□ -1.68
SF3B1-205ENST00000424674 AKAP10O43572 662 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 F2P00734 622 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 HSP90AB1P08238 724 aaKnown RBP4.53□□□□□ -1.68
SF3B1-205ENST00000424674 U2AF1L5P0DN76 240 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-205ENST00000424674 IMPDH2P12268 514 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 BMP8BP34820 402 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 HTR3AP46098 478 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 RTP1P59025 263 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 FAM193AP78312 1265 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 U2AF1Q01081 240 aaKnown RBP eCLIP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms