RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 LARP4BQ92615 738 aaKnown RBP13.4□□□□□ -0.26
CLCN4-203ENST00000421085 KIAA1024Q9UPX6 916 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 MFAP3LO75121 409 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 MFAP3P55082 362 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 LCA5Q86VQ0 697 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
CLCN4-203ENST00000421085 RAPGEF6Q8TEU7 1601 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 EXOC1LA0A1B0GW35 172 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 CREB3O43889 395 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 PDHA1P08559 390 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 EEF1B2P24534 225 aaKnown RBP13.4□□□□□ -0.26
CLCN4-203ENST00000421085 NME8Q8N427 588 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 ADCY2Q08462 1091 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 NBPF9Q3BBW0 867 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 GSPT2Q8IYD1 628 aaKnown RBP13.4□□□□□ -0.26
CLCN4-203ENST00000421085 GRAMD1BQ3KR37 738 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 APOA5Q6Q788 366 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 EFHD1Q9BUP0 239 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 TOM1L1O75674 476 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 SERPING1P05155 500 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 PTK2Q05397 1052 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 SEPT2Q15019 361 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 MAML1Q92585 1016 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 NUB1Q9Y5A7 615 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 LMNAP02545 664 aaKnown RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 BEND6Q5SZJ8 279 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 TRIML2Q8N7C3 387 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 DYDC2Q96IM9 177 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 HAUS2Q9NVX0 235 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 PZPP20742 1482 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 GFPT2O94808 682 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 EEF1DP29692 281 aaKnown RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 CNBD1Q8NA66 436 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 PACSIN2Q9UNF0 486 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 GNGT2O14610 69 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 LRRN2O75325 713 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 POLR2BP30876 1174 aaKnown RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 LRRC24Q50LG9 513 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 KCNV2Q8TDN2 545 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 PITPNM3Q9BZ71 974 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 USP27XA6NNY8 438 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 NCF2P19878 526 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 TMOD1P28289 359 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 STX1BP61266 288 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 ZMAT2Q96NC0 199 aaKnown RBP13.39□□□□□ -0.27
CLCN4-203ENST00000421085 EPC1Q9H2F5 836 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 MAST3O60307 1309 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 LAD1O00515 517 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 ACSL3O95573 720 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 PIK3CAP42336 1068 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 KIF22Q14807 665 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 XKR9Q5GH70 373 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 FAM167BQ9BTA0 163 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 ANKFY1Q9P2R3 1169 aa13.39□□□□□ -0.27
CLCN4-203ENST00000421085 ABCC12Q96J65 1359 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 GNPATO15228 680 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 ZBED4O75132 1171 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PLS3P13797 630 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 ITKQ08881 620 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 MCUQ8NE86 351 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 POMGNT1Q8WZA1 660 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 ZBBXA8MT70 800 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PSMC2P35998 433 aaKnown RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 MB21D1Q8N884 522 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 RASGRP4Q8TDF6 673 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PAGE5Q96GU1 130 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 ZNF496Q96IT1 587 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 MMS19Q96T76 1030 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 NACA2Q9H009 215 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 CACYBPQ9HB71 228 aaKnown RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 M0R2C6 588 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 CFLARO15519 480 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 DCTN3O75935 186 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 HSPA6P17066 643 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 CA4P22748 312 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 KRT31Q15323 416 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 C10orf76Q5T2E6 689 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PRPF31Q8WWY3 499 aaKnown RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PICK1Q9NRD5 415 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 DNAJC17Q9NVM6 304 aaKnown RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 SLC4A7Q9Y6M7 1214 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 MMP1P03956 469 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 CTSWP56202 376 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PARP9Q8IXQ6 854 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PARP3Q9Y6F1 533 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 EIF4E1BA6NMX2 242 aaKnown RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 KCNQ3O43525 872 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 CPP00450 1065 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms