RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 ZNF713Q8N859 430 aaPredicted RBP18.23■□□□□ 0.51
VAT1-202ENST00000420567 STARD7Q9NQZ5 370 aa18.23■□□□□ 0.51
VAT1-202ENST00000420567 BARHL2Q9NY43 387 aa18.23■□□□□ 0.51
VAT1-202ENST00000420567 TPCN1Q9ULQ1 816 aa18.23■□□□□ 0.51
VAT1-202ENST00000420567 Q9Y3F1 56 aa18.23■□□□□ 0.51
VAT1-202ENST00000420567 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
VAT1-202ENST00000420567 MRVI1Q9Y6F6 885 aa18.23■□□□□ 0.51
VAT1-202ENST00000420567 BAZ2BQ9UIF8 2168 aaKnown RBP18.23■□□□□ 0.51
VAT1-202ENST00000420567 CPLX1O14810 134 aa18.22■□□□□ 0.51
VAT1-202ENST00000420567 RGS20O76081 388 aa18.22■□□□□ 0.51
VAT1-202ENST00000420567 IFNAR1P17181 557 aa18.22■□□□□ 0.51
VAT1-202ENST00000420567 ADCY7P51828 1080 aa18.22■□□□□ 0.51
VAT1-202ENST00000420567 AKAP17AQ02040 695 aaKnown RBP18.22■□□□□ 0.51
VAT1-202ENST00000420567 PKN1Q16512 942 aa18.22■□□□□ 0.51
VAT1-202ENST00000420567 CCDC62Q6P9F0 684 aa18.22■□□□□ 0.51
VAT1-202ENST00000420567 CXCL17Q6UXB2 119 aa18.22■□□□□ 0.51
VAT1-202ENST00000420567 GLT1D1Q96MS3 346 aa18.22■□□□□ 0.51
VAT1-202ENST00000420567 RNF26Q9BY78 433 aaPredicted RBP18.22■□□□□ 0.51
VAT1-202ENST00000420567 SMCO2A6NFE2 343 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 SPDYE3A6NKU9 549 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 NKRFO15226 690 aaKnown RBP eCLIP18.21■□□□□ 0.51
VAT1-202ENST00000420567 NEK4P51957 841 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 SCRN1Q12765 414 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 SNX17Q15036 470 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 VTI1AQ96AJ9 217 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 PGBD1Q96JS3 809 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 ALDH8A1Q9H2A2 487 aaPredicted RBP18.21■□□□□ 0.51
VAT1-202ENST00000420567 RIC8AQ9NPQ8 531 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 RTEL1Q9NZ71 1219 aa18.21■□□□□ 0.51
VAT1-202ENST00000420567 RBM27Q9P2N5 1060 aaKnown RBP18.21■□□□□ 0.51
VAT1-202ENST00000420567 ALPK3Q96L96 1907 aa18.2■□□□□ 0.5
VAT1-202ENST00000420567 ZEB2O60315 1214 aa18.2■□□□□ 0.5
VAT1-202ENST00000420567 SORBS3O60504 671 aa18.2■□□□□ 0.5
VAT1-202ENST00000420567 GH1P01241 217 aa18.2■□□□□ 0.5
VAT1-202ENST00000420567 MRPS9P82933 396 aaKnown RBP18.2■□□□□ 0.5
VAT1-202ENST00000420567 ANKRD1Q15327 319 aa18.2■□□□□ 0.5
VAT1-202ENST00000420567 SLKQ9H2G2 1235 aaPredicted RBP18.2■□□□□ 0.5
VAT1-202ENST00000420567 TMEM260Q9NX78 707 aa18.2■□□□□ 0.5
VAT1-202ENST00000420567 DDX41Q9UJV9 622 aaKnown RBP18.2■□□□□ 0.5
VAT1-202ENST00000420567 PCDHA6Q9UN73 950 aa18.2■□□□□ 0.5
VAT1-202ENST00000420567 PCDHA8Q9Y5H6 950 aa18.2■□□□□ 0.5
VAT1-202ENST00000420567 MKI67P46013 3256 aaKnown RBP18.2■□□□□ 0.5
VAT1-202ENST00000420567 PFKFB2O60825 505 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 PQBP1O60828 265 aaKnown RBP18.19■□□□□ 0.5
VAT1-202ENST00000420567 DTNBO60941 627 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 LARGE1O95461 756 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 MYL3P08590 195 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 CPT1AP50416 773 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 PSMC6P62333 389 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 ARHGAP1Q07960 439 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 SSRP1Q08945 709 aaKnown RBP18.19■□□□□ 0.5
VAT1-202ENST00000420567 PCNX4Q63HM2 1172 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 C22orf23Q9BZE7 217 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 VPS54Q9P1Q0 977 aa18.19■□□□□ 0.5
VAT1-202ENST00000420567 ADAMTS3O15072 1205 aa18.18■□□□□ 0.5
VAT1-202ENST00000420567 UBA1P22314 1058 aaKnown RBP18.18■□□□□ 0.5
VAT1-202ENST00000420567 TLE2Q04725 743 aa18.18■□□□□ 0.5
VAT1-202ENST00000420567 GNPTABQ3T906 1256 aa18.18■□□□□ 0.5
VAT1-202ENST00000420567 C1orf53Q5VUE5 145 aa18.18■□□□□ 0.5
VAT1-202ENST00000420567 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
VAT1-202ENST00000420567 AFG1LQ8WV93 481 aa18.18■□□□□ 0.5
VAT1-202ENST00000420567 INPP4AQ96PE3 977 aaPredicted RBP18.18■□□□□ 0.5
VAT1-202ENST00000420567 PRDM5Q9NQX1 630 aaPredicted RBP18.18■□□□□ 0.5
VAT1-202ENST00000420567 ELP1O95163 1332 aa18.18■□□□□ 0.5
VAT1-202ENST00000420567 A0A0U1RQG5 324 aaPredicted RBP18.17■□□□□ 0.5
VAT1-202ENST00000420567 PURAQ00577 322 aaKnown RBP18.17■□□□□ 0.5
VAT1-202ENST00000420567 SP2Q02086 613 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 ME3Q16798 604 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 BRDTQ58F21 947 aaPredicted RBP18.17■□□□□ 0.5
VAT1-202ENST00000420567 JAKMIP3Q5VZ66 844 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 CHRDL2Q6WN34 429 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 CCDC12Q8WUD4 166 aaPredicted RBP18.17■□□□□ 0.5
VAT1-202ENST00000420567 KIF2CQ99661 725 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 ANO3Q9BYT9 981 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 EHMT1Q9H9B1 1298 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 C6orf50Q9HD87 102 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
VAT1-202ENST00000420567 ESYT2A0FGR8 921 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 A6NJR5 290 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 STAM2O75886 525 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 CABYRO75952 493 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 DEXIO95424 95 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 GGPS1O95749 300 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 MMP3P08254 477 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 CLK2P49760 499 aaKnown RBP18.16■□□□□ 0.5
VAT1-202ENST00000420567 SEMA3FQ13275 785 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 AP3B2Q13367 1082 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 XRRA1Q6P2D8 792 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 DHX37Q8IY37 1157 aaKnown RBP18.16■□□□□ 0.5
VAT1-202ENST00000420567 CCDC148Q8NFR7 591 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 AIFM3Q96NN9 605 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 ZMYND12Q9H0C1 365 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 GLT8D2Q9H1C3 349 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 PDLIM7Q9NR12 457 aa18.16■□□□□ 0.5
VAT1-202ENST00000420567 SPATA31C2B4DYI2 1134 aa18.15■□□□□ 0.5
VAT1-202ENST00000420567 ARVCFO00192 962 aa18.15■□□□□ 0.5
VAT1-202ENST00000420567 FIBPO43427 364 aa18.15■□□□□ 0.5
VAT1-202ENST00000420567 CDKL5O76039 1030 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms