RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CD2APQ9Y5K6 639 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 X6R8D5 127 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 MYO15BQ96JP2 1530 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.82□□□□□ -1.8
VPS41-206ENST00000418457 FAM47E-STBD1D6RA91 191 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 ABLIM1O14639 778 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 SOD2P04179 222 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 NTRK1P04629 796 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 ZEB1P37275 1124 aaPredicted RBP3.82□□□□□ -1.8
VPS41-206ENST00000418457 PAK1Q13153 545 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 C21orf62-AS1Q17RA5 79 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 TAF7LQ5H9L4 462 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 PAQR3Q6TCH7 311 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 KIAA0907Q7Z7F0 614 aaPredicted RBP3.82□□□□□ -1.8
VPS41-206ENST00000418457 DCP2Q8IU60 420 aaKnown RBP3.82□□□□□ -1.8
VPS41-206ENST00000418457 NETO2Q8NC67 525 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 CLUHP3Q96NS8 147 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 DIRC2Q96SL1 478 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 SLKQ9H2G2 1235 aaPredicted RBP3.82□□□□□ -1.8
VPS41-206ENST00000418457 EPB41L1Q9H4G0 881 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 NSUN3Q9H649 340 aaKnown RBP3.82□□□□□ -1.8
VPS41-206ENST00000418457 IPPKQ9H8X2 491 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 TRIM39Q9HCM9 518 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 PLAAQ9Y263 795 aa3.82□□□□□ -1.8
VPS41-206ENST00000418457 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.82□□□□□ -1.8
VPS41-206ENST00000418457 CADPSQ9ULU8 1353 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 ZC3H12DA2A288 527 aaKnown RBP3.81□□□□□ -1.8
VPS41-206ENST00000418457 LRRC10BA6NIK2 292 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 F8W031 263 aaPredicted RBP3.81□□□□□ -1.8
VPS41-206ENST00000418457 ARVCFO00192 962 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 DGKIO75912 1065 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 RASGRP1O95267 797 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 SLC6A11P48066 632 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 MAPKAPK2P49137 400 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 CHRNA2Q15822 529 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 MLANAQ16655 118 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 FAM47CQ5HY64 1035 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 OLFML2BQ68BL8 750 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 RPTNQ6XPR3 784 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 PRR23BQ6ZRT6 265 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 FGD2Q7Z6J4 655 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 ZNF605Q86T29 641 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 ZC3H7AQ8IWR0 971 aaKnown RBP3.81□□□□□ -1.8
VPS41-206ENST00000418457 SEC14L1Q92503 715 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 NINJ1Q92982 152 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 PEX11GQ96HA9 241 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 SCLYQ96I15 445 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 KCNJ15Q99712 375 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 JAM3Q9BX67 310 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 AP5M1Q9H0R1 490 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 CDIP1Q9H305 208 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 EPB41L4BQ9H329 900 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 ZNF552Q9H707 407 aaPredicted RBP3.81□□□□□ -1.8
VPS41-206ENST00000418457 RXFP1Q9HBX9 757 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 DCP1AQ9NPI6 582 aaPredicted RBP3.81□□□□□ -1.8
VPS41-206ENST00000418457 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.81□□□□□ -1.8
VPS41-206ENST00000418457 KLHL14Q9P2G3 628 aa3.81□□□□□ -1.8
VPS41-206ENST00000418457 TCRBV16S1A1N1A0A5B0 115 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 B4E1Z4 1266 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 HRKO00198 91 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 KRIT1O00522 736 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 GSTA4O15217 222 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 OPA1O60313 960 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 MAFKO60675 156 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 DNAJC8O75937 253 aaPredicted RBP3.8□□□□□ -1.8
VPS41-206ENST00000418457 ZBTB7AO95365 584 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 ASLP04424 464 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 SRGAP2CP0DJJ0 459 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 GNAT1P11488 350 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 IGFALSP35858 605 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 YBX1P67809 324 aaKnown RBP3.8□□□□□ -1.8
VPS41-206ENST00000418457 ST5P78524 1137 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 SPIRE1Q08AE8 756 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 PLEKHN1Q494U1 663 aaPredicted RBP3.8□□□□□ -1.8
VPS41-206ENST00000418457 DALRD3Q5D0E6 543 aaKnown RBP3.8□□□□□ -1.8
VPS41-206ENST00000418457 EGFLAMQ63HQ2 1017 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 ZC3H14Q6PJT7 736 aaKnown RBP3.8□□□□□ -1.8
VPS41-206ENST00000418457 NIM1KQ8IY84 436 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 PCDH19Q8TAB3 1148 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 FBXW5Q969U6 566 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 INTS7Q9NVH2 962 aaKnown RBP3.8□□□□□ -1.8
VPS41-206ENST00000418457 MAGEC2Q9UBF1 373 aaPredicted RBP3.8□□□□□ -1.8
VPS41-206ENST00000418457 SIT1Q9Y3P8 196 aa3.8□□□□□ -1.8
VPS41-206ENST00000418457 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 IRS4O14654 1257 aaPredicted RBP3.79□□□□□ -1.8
VPS41-206ENST00000418457 WNT9AO14904 365 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 HGSO14964 777 aaPredicted RBP3.79□□□□□ -1.8
VPS41-206ENST00000418457 SGSM2O43147 1006 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 PEX10O60683 326 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 PYGMP11217 842 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 SDSP20132 328 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 VIPR1P32241 457 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 FLT3P36888 993 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 DNM2P50570 870 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 GYS2P54840 703 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 SRSF3P84103 164 aaKnown RBP3.79□□□□□ -1.8
VPS41-206ENST00000418457 PRR5P85299 388 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 SLC9A5Q14940 896 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 CRY1Q16526 586 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 EMC4Q5J8M3 183 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms