RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 CCNL1Q9UK58 526 aaPredicted RBP7.91□□□□□ -1.14
EPHA4-204ENST00000415749 TTC21BQ7Z4L5 1316 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 CPSF1Q10570 1443 aaKnown RBP7.91□□□□□ -1.14
EPHA4-204ENST00000415749 SLIT3O75094 1523 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 NHSQ6T4R5 1651 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 BTAF1O14981 1849 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 IGSF1Q8N6C5 1336 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 FAM86C2PA6NEL3 165 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 FAM170BA6NMN3 283 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 WDR64B1ANS9 1081 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 IGF2BP3O00425 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
EPHA4-204ENST00000415749 EOMESO95936 686 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 ZEB1P37275 1124 aaPredicted RBP7.9□□□□□ -1.14
EPHA4-204ENST00000415749 PMS1P54277 932 aaKnown RBP7.9□□□□□ -1.14
EPHA4-204ENST00000415749 C2orf27AQ580R0 203 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 ODR4Q5SWX8 454 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 SFRP5Q5T4F7 317 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 LARP1BQ659C4 914 aaKnown RBP7.9□□□□□ -1.14
EPHA4-204ENST00000415749 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 ZNF765Q7L2R6 523 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 FLAD1Q8NFF5 587 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 RIN3Q8TB24 985 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 SHKBP1Q8TBC3 707 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 KREMEN1Q96MU8 473 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 HOMER2Q9NSB8 354 aa7.9□□□□□ -1.14
EPHA4-204ENST00000415749 MAGEC2Q9UBF1 373 aaPredicted RBP7.9□□□□□ -1.14
EPHA4-204ENST00000415749 SUCOQ9UBS9 1254 aaKnown RBP7.9□□□□□ -1.14
EPHA4-204ENST00000415749 RGPD5Q99666 1765 aa7.89□□□□□ -1.15
EPHA4-204ENST00000415749 ARHGEF28Q8N1W1 1705 aaKnown RBP7.89□□□□□ -1.15
EPHA4-204ENST00000415749 GNAT3A8MTJ3 354 aa7.89□□□□□ -1.15
EPHA4-204ENST00000415749 KIR3DL1P43629 444 aa7.89□□□□□ -1.15
EPHA4-204ENST00000415749 ZYXQ15942 572 aaKnown RBP7.89□□□□□ -1.15
EPHA4-204ENST00000415749 C16orf71Q8IYS4 520 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-204ENST00000415749 MORC4Q8TE76 937 aa7.89□□□□□ -1.15
EPHA4-204ENST00000415749 THAP3Q8WTV1 239 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-204ENST00000415749 CEP89Q96ST8 783 aa7.89□□□□□ -1.15
EPHA4-204ENST00000415749 TNKS2Q9H2K2 1166 aa7.89□□□□□ -1.15
EPHA4-204ENST00000415749 NMRK2Q9NPI5 230 aa7.89□□□□□ -1.15
EPHA4-204ENST00000415749 PFDN2Q9UHV9 154 aa7.89□□□□□ -1.15
EPHA4-204ENST00000415749 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-204ENST00000415749 KDM2BQ8NHM5 1336 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 WNK3Q9BYP7 1800 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 ASMTLO95671 621 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 HMGB2P26583 209 aaKnown RBP7.88□□□□□ -1.15
EPHA4-204ENST00000415749 SLC7A5Q01650 507 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 NCAPHQ15003 741 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 TCEA2Q15560 299 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 GNPTABQ3T906 1256 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 TMEM192Q8IY95 271 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 CCDC146Q8IYE0 955 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 FBXL18Q96ME1 805 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 KCNH3Q9ULD8 1083 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 QSER1Q2KHR3 1735 aa7.88□□□□□ -1.15
EPHA4-204ENST00000415749 TTC21AQ8NDW8 1320 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 CENPJQ9HC77 1338 aaPredicted RBP7.87□□□□□ -1.15
EPHA4-204ENST00000415749 LTBP3Q9NS15 1303 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 GJB6O95452 261 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 VIL1P09327 827 aaKnown RBP7.87□□□□□ -1.15
EPHA4-204ENST00000415749 FSTL1Q12841 308 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 NBPF12Q5TAG4 269 aaPredicted RBP7.87□□□□□ -1.15
EPHA4-204ENST00000415749 VHLLQ6RSH7 139 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 CCDC136Q96JN2 1154 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 MKRN2Q9H000 416 aaKnown RBP7.87□□□□□ -1.15
EPHA4-204ENST00000415749 MKNK2Q9HBH9 465 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 PTCH2Q9Y6C5 1203 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 ABCC6O95255 1503 aa7.87□□□□□ -1.15
EPHA4-204ENST00000415749 ANKRD36BQ8N2N9 1353 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 TRPM1Q7Z4N2 1603 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 DIAPH1O60610 1272 aaKnown RBP7.86□□□□□ -1.15
EPHA4-204ENST00000415749 DDAH1O94760 285 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 FURINP09958 794 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 NAT2P11245 290 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 CNGA1P29973 690 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 C21orf62-AS1Q17RA5 79 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 DALRD3Q5D0E6 543 aaKnown RBP7.86□□□□□ -1.15
EPHA4-204ENST00000415749 FAM214BQ7L5A3 538 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 KRT26Q7Z3Y9 468 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 CCAR1Q8IX12 1150 aaKnown RBP7.86□□□□□ -1.15
EPHA4-204ENST00000415749 FAM178BQ8IXR5 827 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 CCDC144CPQ8IYA2 1237 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 SGSM3Q96HU1 749 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 PIM2Q9P1W9 311 aa7.86□□□□□ -1.15
EPHA4-204ENST00000415749 USP47Q96K76 1375 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 CYP26A1O43174 497 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 CBX7O95931 251 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 ZNF865P0CJ78 1059 aaPredicted RBP7.85□□□□□ -1.15
EPHA4-204ENST00000415749 HSPA1AP0DMV8 641 aaKnown RBP7.85□□□□□ -1.15
EPHA4-204ENST00000415749 HSPA1BP0DMV9 641 aaKnown RBP7.85□□□□□ -1.15
EPHA4-204ENST00000415749 TBX4P57082 545 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 C6orf15Q6UXA7 325 aaPredicted RBP7.85□□□□□ -1.15
EPHA4-204ENST00000415749 SPATC1Q76KD6 591 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 JAMLQ86YT9 394 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 ZDHHC13Q8IUH4 622 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 SHISA5Q8N114 240 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 MFSD4AQ8N468 514 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 PIWIL2Q8TC59 973 aaKnown RBP7.85□□□□□ -1.15
EPHA4-204ENST00000415749 PMM1Q92871 262 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 HEXIM2Q96MH2 286 aaKnown RBP7.85□□□□□ -1.15
EPHA4-204ENST00000415749 SEMA6BQ9H3T3 888 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms