RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 HSP90AA4PQ58FG1 418 aa8.61□□□□□ -1.03
SIK3-203ENST00000415541 SLC27A3Q5K4L6 730 aa8.61□□□□□ -1.03
SIK3-203ENST00000415541 TBC1D10CQ8IV04 446 aa8.61□□□□□ -1.03
SIK3-203ENST00000415541 MMTAG2Q9BU76 263 aaKnown RBP8.61□□□□□ -1.03
SIK3-203ENST00000415541 PCDHGA4Q9Y5G9 962 aa8.61□□□□□ -1.03
SIK3-203ENST00000415541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.61□□□□□ -1.03
SIK3-203ENST00000415541 TNKSO95271 1327 aa8.61□□□□□ -1.03
SIK3-203ENST00000415541 CARMIL3Q8ND23 1372 aa8.61□□□□□ -1.03
SIK3-203ENST00000415541 PAFAH1B1P43034 410 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 KRT83P78385 493 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 TAF11Q15544 211 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 IFI16Q16666 785 aaKnown RBP8.6□□□□□ -1.03
SIK3-203ENST00000415541 TTMPQ5BVD1 217 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 ZNF654Q8IZM8 581 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 GBP7Q8N8V2 638 aaPredicted RBP8.6□□□□□ -1.03
SIK3-203ENST00000415541 SEC16BQ96JE7 1060 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 HSD3B7Q9H2F3 369 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 RMI1Q9H9A7 625 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 PRDM16Q9HAZ2 1276 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 JADE2Q9NQC1 790 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 MFAP3LO75121 409 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 POLD1P28340 1107 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 ALDH3A1P30838 453 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 LACTBP83111 547 aaPredicted RBP8.6□□□□□ -1.03
SIK3-203ENST00000415541 PAK2Q13177 524 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 MAATS1Q7Z4T9 603 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 IFT20Q8IY31 132 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 ACRBPQ8NEB7 543 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 ZNF274Q96GC6 653 aaPredicted RBP8.6□□□□□ -1.03
SIK3-203ENST00000415541 AIFM3Q96NN9 605 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 LRRC4BQ9NT99 713 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 USP40Q9NVE5 1235 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 RNF8O76064 485 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 ECEL1O95672 775 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 CYP2D6P10635 497 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 DESP17661 470 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 CD151P48509 253 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 SH3BGRP55822 239 aaPredicted RBP8.6□□□□□ -1.03
SIK3-203ENST00000415541 GPSM2P81274 684 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 ATP11AP98196 1134 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 NR1I3Q14994 352 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 EMC10Q5UCC4 262 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 DYNLL2Q96FJ2 89 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 ATP6V1G3Q96LB4 118 aa8.6□□□□□ -1.03
SIK3-203ENST00000415541 NUP88Q99567 741 aaPredicted RBP8.6□□□□□ -1.03
SIK3-203ENST00000415541 SIPA1L3O60292 1781 aaPredicted RBP8.6□□□□□ -1.03
SIK3-203ENST00000415541 PCK1P35558 622 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 CCDC122Q5T0U0 273 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 ANO1Q5XXA6 986 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 KRT40Q6A162 431 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 APOA5Q6Q788 366 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 TXNRD3Q86VQ6 643 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 MMGT1Q8N4V1 131 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 SH2D3CQ8N5H7 860 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 C1orf131Q8NDD1 294 aaKnown RBP8.59□□□□□ -1.03
SIK3-203ENST00000415541 NSUN7Q8NE18 718 aaKnown RBP8.59□□□□□ -1.03
SIK3-203ENST00000415541 CAVIN3Q969G5 261 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 CNKSR1Q969H4 720 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 MMADHCQ9H3L0 296 aaPredicted RBP8.59□□□□□ -1.03
SIK3-203ENST00000415541 INTS13Q9NVM9 706 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 CEP131Q9UPN4 1083 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 DNM1LO00429 736 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 ZSCAN9O15535 394 aaPredicted RBP8.59□□□□□ -1.03
SIK3-203ENST00000415541 VIMP08670 466 aaKnown RBP8.59□□□□□ -1.03
SIK3-203ENST00000415541 GYS1P13807 737 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 CHRNA5P30532 468 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 PAPD7Q5XG87 772 aaKnown RBP8.59□□□□□ -1.03
SIK3-203ENST00000415541 RUFY4Q6ZNE9 571 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 DEFB132Q7Z7B7 95 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 CCDC197Q8NCU1 140 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 JDP2Q8WYK2 163 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 SLF1Q9BQI6 1058 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 CD209Q9NNX6 404 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 CABP5Q9NP86 173 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 ZNF232Q9UNY5 417 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 ANO9A1A5B4 782 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 A6NHS1 94 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 GSG1L2A8MUP6 293 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 PDLIM1O00151 329 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 PNOCQ13519 176 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 DIS3L2Q8IYB7 885 aaKnown RBP8.59□□□□□ -1.03
SIK3-203ENST00000415541 IFT74Q96LB3 600 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 CCDC43Q96MW1 224 aaKnown RBP8.59□□□□□ -1.03
SIK3-203ENST00000415541 OSBPL7Q9BZF2 842 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 VCX3BQ9H321 246 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 VCX3AQ9NNX9 186 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 VPS54Q9P1Q0 977 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 RGPD5Q99666 1765 aa8.59□□□□□ -1.03
SIK3-203ENST00000415541 A0A1B0GTH6 734 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 FLOT1O75955 427 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 ZBTB7AO95365 584 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 FMNL1O95466 1100 aaPredicted RBP8.58□□□□□ -1.04
SIK3-203ENST00000415541 TFRCP02786 760 aaKnown RBP8.58□□□□□ -1.04
SIK3-203ENST00000415541 HPDP32754 393 aaPredicted RBP8.58□□□□□ -1.04
SIK3-203ENST00000415541 KIAA0753Q2KHM9 967 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 KLHL10Q6JEL2 608 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 CYB5R4Q7L1T6 521 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 TRIML1Q8N9V2 468 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 FBF1Q8TES7 1133 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 ZIM3Q96PE6 472 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms