RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 EIF3JO75822 258 aaKnown RBP12.64□□□□□ -0.39
A1CF-208ENST00000414883 PURAQ00577 322 aaKnown RBP12.64□□□□□ -0.39
A1CF-208ENST00000414883 PGM5Q15124 567 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 PPP2R5BQ15173 497 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 STXBP2Q15833 593 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 LY6KQ17RY6 165 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 RRP36Q96EU6 259 aaKnown RBP12.64□□□□□ -0.39
A1CF-208ENST00000414883 USP26Q9BXU7 913 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 DDX41Q9UJV9 622 aaKnown RBP12.64□□□□□ -0.39
A1CF-208ENST00000414883 NID2Q14112 1375 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 SPTBN5Q9NRC6 3674 aaKnown RBP12.64□□□□□ -0.39
A1CF-208ENST00000414883 GCOM1H8Y6P7 765 aaPredicted RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 EPB41L2O43491 1005 aaKnown RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 CABYRO75952 493 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 REC8O95072 547 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 POLR2MP0CAP2 368 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 TXNP10599 105 aaKnown RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 CDC27P30260 824 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 EPHB4P54760 987 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 PSMC6P62333 389 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 MRPS9P82933 396 aaKnown RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 TRAF1Q13077 416 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 TTLL4Q14679 1199 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 USP17L6PQ6QN14 398 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 TDHQ8IZJ6 230 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 CCDC82Q8N4S0 544 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 OR6J1Q8NGC5 347 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 GPKOWQ92917 476 aaPredicted RBP eCLIP12.63□□□□□ -0.39
A1CF-208ENST00000414883 BADQ92934 168 aa12.63□□□□□ -0.39
A1CF-208ENST00000414883 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 UBE2OQ9C0C9 1292 aaKnown RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 PRDM5Q9NQX1 630 aaPredicted RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 TRIP12Q14669 1992 aaPredicted RBP12.63□□□□□ -0.39
A1CF-208ENST00000414883 KLF18A0A0U1RQI7 1052 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 B4DLN1 442 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 ZBTB43O43298 467 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 RPS6KB1P23443 525 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
A1CF-208ENST00000414883 RCAN1P53805 252 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 SP2Q02086 613 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 SEMA3FQ13275 785 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 ITGA7Q13683 1181 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 LRIT3Q3SXY7 679 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 Q6ZUG5 572 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 EMID1Q96A84 441 aaPredicted RBP12.62□□□□□ -0.39
A1CF-208ENST00000414883 LRCH3Q96II8 777 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
A1CF-208ENST00000414883 MPHOSPH6Q99547 160 aaKnown RBP12.62□□□□□ -0.39
A1CF-208ENST00000414883 BCAS3Q9H6U6 928 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
A1CF-208ENST00000414883 VCANP13611 3396 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 DCDC2CA8MYV0 355 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 ZEB2O60315 1214 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 CENPBP07199 599 aaPredicted RBP12.61□□□□□ -0.39
A1CF-208ENST00000414883 HOXD8P13378 290 aaPredicted RBP12.61□□□□□ -0.39
A1CF-208ENST00000414883 CPT1AP50416 773 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 EVCP57679 992 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 APOBRQ0VD83 1088 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 RTN1Q16799 776 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 C9orf50Q5SZB4 431 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 WWC2Q6AWC2 1192 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 FCHSD1Q86WN1 690 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 KAT2BQ92831 832 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 VTI1AQ96AJ9 217 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 VWCEQ96DN2 955 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 LBHD1Q9BQE6 289 aaPredicted RBP12.61□□□□□ -0.39
A1CF-208ENST00000414883 TRPV6Q9H1D0 765 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 TMEM39AQ9NV64 488 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 SCN5AQ14524 2016 aa12.61□□□□□ -0.39
A1CF-208ENST00000414883 B4GALT4O60513 344 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 TIMP1P01033 207 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 GH1P01241 217 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 MMP3P08254 477 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
A1CF-208ENST00000414883 ADD1P35611 737 aaKnown RBP12.6□□□□□ -0.39
A1CF-208ENST00000414883 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
A1CF-208ENST00000414883 SHHQ15465 462 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 BLOC1S2Q6QNY1 142 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 TET1Q8NFU7 2136 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 PPP1R13LQ8WUF5 828 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 BRF1Q92994 677 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 INPP4AQ96PE3 977 aaPredicted RBP12.6□□□□□ -0.39
A1CF-208ENST00000414883 CTAGE1Q96RT6 745 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 MTG1Q9BT17 334 aaPredicted RBP12.6□□□□□ -0.39
A1CF-208ENST00000414883 ALDH8A1Q9H2A2 487 aaPredicted RBP12.6□□□□□ -0.39
A1CF-208ENST00000414883 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 POLR3EQ9NVU0 708 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
A1CF-208ENST00000414883 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
A1CF-208ENST00000414883 SEC63Q9UGP8 760 aaKnown RBP12.6□□□□□ -0.39
A1CF-208ENST00000414883 GOLGA8AA7E2F4 631 aa12.59□□□□□ -0.39
A1CF-208ENST00000414883 GOLGA8BA8MQT2 603 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms