RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 LDLRAD1Q5T700 205 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 NSMFQ6X4W1 530 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 RNF207Q6ZRF8 634 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 SPATA20Q8TB22 786 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 ETNPPLQ8TBG4 499 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 SNX29Q8TEQ0 813 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 STAMQ92783 540 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 GJA10Q969M2 543 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 GSDMAQ96QA5 445 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 MAGEF1Q9HAY2 307 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 MAN1B1Q9UKM7 699 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 ZNF214Q9UL59 606 aaPredicted RBP11.56□□□□□ -0.56
TRIM27-203ENST00000414543 KCNH4Q9UQ05 1017 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 TRAF5O00463 557 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 SOCS7O14512 581 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 HOXA7P31268 230 aaPredicted RBP11.56□□□□□ -0.56
TRIM27-203ENST00000414543 STAT3P40763 770 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 RPS6P62753 249 aaKnown RBP11.56□□□□□ -0.56
TRIM27-203ENST00000414543 IRX3P78415 501 aaPredicted RBP11.56□□□□□ -0.56
TRIM27-203ENST00000414543 IQCB1Q15051 598 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 NAALADL2Q58DX5 795 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
TRIM27-203ENST00000414543 PLA2G4DQ86XP0 818 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 SYTL5Q8TDW5 730 aaPredicted RBP11.56□□□□□ -0.56
TRIM27-203ENST00000414543 LENG9Q96B70 501 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 UIMC1Q96RL1 719 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 BPIFA3Q9BQP9 254 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 MMTAG2Q9BU76 263 aaKnown RBP11.56□□□□□ -0.56
TRIM27-203ENST00000414543 DACH1Q9UI36 760 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 RIPK3Q9Y572 518 aa11.56□□□□□ -0.56
TRIM27-203ENST00000414543 PTPRFP10586 1907 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 COL11A1P12107 1806 aaPredicted RBP11.55□□□□□ -0.56
TRIM27-203ENST00000414543 IGLV3-22A0A075B6J6 115 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 MSH4O15457 936 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 MYL1P05976 194 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 AMPD3Q01432 767 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 PABPC4Q13310 644 aaKnown RBP eCLIP11.55□□□□□ -0.561e-8■■■■□ 21.6
TRIM27-203ENST00000414543 MORC3Q14149 939 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 CEP55Q53EZ4 464 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 AOPEPQ8N6M6 819 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 MB21D1Q8N884 522 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 MLKLQ8NB16 471 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 ERMNQ8TAM6 284 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 CYP2W1Q8TAV3 490 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 BLZF1Q9H2G9 400 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 COL20A1Q9P218 1284 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 STK24Q9Y6E0 443 aa11.55□□□□□ -0.56
TRIM27-203ENST00000414543 RBBP6Q7Z6E9 1792 aaKnown RBP11.55□□□□□ -0.56
TRIM27-203ENST00000414543 RPTORQ8N122 1335 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 KDM3AQ9Y4C1 1321 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 SLC26A4O43511 780 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 CASP1P29466 404 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 CCT6AP40227 531 aaKnown RBP11.54□□□□□ -0.56
TRIM27-203ENST00000414543 TPM4P67936 248 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 FKBP1BP68106 108 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 SETQ01105 290 aaPredicted RBP11.54□□□□□ -0.56
TRIM27-203ENST00000414543 GRB10Q13322 594 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 SLC30A10Q6XR72 485 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 TAAR1Q96RJ0 339 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 PPP1R9BQ96SB3 815 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 MTRQ99707 1265 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 MXRA8Q9BRK3 442 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 MAF1Q9H063 256 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 NT5C3AQ9H0P0 336 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 ACAD9Q9H845 621 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 KBTBD4Q9NVX7 518 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 RMND1Q9NWS8 449 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 AGTPBP1Q9UPW5 1226 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 UTRNP46939 3433 aa11.54□□□□□ -0.56
TRIM27-203ENST00000414543 MEIS1O00470 390 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 OSBPP22059 807 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 FMR1Q06787 632 aaKnown RBP eCLIP11.53□□□□□ -0.562e-10■■□□□ 11.8
TRIM27-203ENST00000414543 SNAPC2Q13487 334 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 CUL4BQ13620 913 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 BAATQ14032 418 aaPredicted RBP11.53□□□□□ -0.56
TRIM27-203ENST00000414543 ARHGEF16Q5VV41 709 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 HAUS3Q68CZ6 603 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 NCAPH2Q6IBW4 605 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 LBX2Q6XYB7 198 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 SV2BQ7L1I2 683 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 DHX40Q8IX18 779 aaKnown RBP11.53□□□□□ -0.56
TRIM27-203ENST00000414543 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 PNMA5Q96PV4 448 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 RMDN3Q96TC7 470 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 GBA2Q9HCG7 927 aaPredicted RBP11.53□□□□□ -0.56
TRIM27-203ENST00000414543 ADCY5O95622 1261 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 RPN1P04843 607 aaKnown RBP11.53□□□□□ -0.56
TRIM27-203ENST00000414543 EIF2AK2P19525 551 aaKnown RBP11.53□□□□□ -0.56
TRIM27-203ENST00000414543 BMP6P22004 513 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 LRCH2Q5VUJ6 765 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 PCNX4Q63HM2 1172 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 NIPA1Q7RTP0 329 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 CHST13Q8NET6 341 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 CCDC47Q96A33 483 aaKnown RBP11.53□□□□□ -0.56
TRIM27-203ENST00000414543 NUDT12Q9BQG2 462 aa11.53□□□□□ -0.56
TRIM27-203ENST00000414543 LRRC27Q9C0I9 530 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms