RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 ZNF771Q7L3S4 317 aaPredicted RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 DTX1Q86Y01 620 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 DZIP1Q86YF9 867 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 CCDC65Q8IXS2 484 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 TTLL6Q8N841 843 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 FAM184AQ8NB25 1140 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 UHMK1Q8TAS1 419 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 TIGD1Q96MW7 591 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 UBL7Q96S82 380 aaPredicted RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 MAP3K14Q99558 947 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 CEP41Q9BYV8 373 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 BACH2Q9BYV9 841 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 XPO4Q9C0E2 1151 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 KMT5AQ9NQR1 393 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 KLK14Q9P0G3 267 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 SRP68Q9UHB9 627 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 MRPS23Q9Y3D9 190 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 SCN4AP35499 1836 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 RGPD2P0DJD1 1756 aa4.53□□□□□ -1.69
LINC01048-201ENST00000414480 DLEC1Q9Y238 1755 aa4.53□□□□□ -1.69
LINC01048-201ENST00000414480 KTN1Q86UP2 1357 aaKnown RBP4.53□□□□□ -1.69
LINC01048-201ENST00000414480 PCDH11XQ9BZA7 1347 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 PCDH11YQ9BZA8 1340 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ZNF541Q9H0D2 1346 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 CCDC163A0A0D9SF12 145 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ANKRD18BA2A2Z9 1011 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 PRSS47A8MTI9 375 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 SCAMP3O14828 347 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 DIAPH1O60610 1272 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ECEL1O95672 775 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 WNT11O96014 354 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 EGFRP00533 1210 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 PSAPP07602 524 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 HNRNPCP07910 306 aaKnown RBP eCLIP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 HOXD8P13378 290 aaPredicted RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 RPL17P18621 184 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 FBLN1P23142 703 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 IL4RP24394 825 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 CDC27P30260 824 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 STIP1P31948 543 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 EPHX2P34913 555 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 RFC4P35249 363 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 SOX18P35713 384 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ZBED6P86452 979 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 NUCB1Q02818 461 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 WTAPQ15007 396 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 PTPN14Q15678 1187 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 FXNQ16595 210 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ZSCAN26Q16670 478 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 PARP10Q53GL7 1025 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 EAPPQ56P03 285 aaPredicted RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ANKRD45Q5TZF3 282 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ANO1Q5XXA6 986 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 CIAPIN1Q6FI81 312 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ZNF746Q6NUN9 644 aaPredicted RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 SYNE3Q6ZMZ3 975 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 CCDC91Q7Z6B0 441 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 SAPCD2Q86UD0 394 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ARMC10Q8N2F6 343 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 USHBP1Q8N6Y0 703 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 SLC17A8Q8NDX2 589 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 GABPB2Q8TAK5 448 aaPredicted RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 ADAMTS19Q8TE59 1207 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 JARID2Q92833 1246 aaPredicted RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 FEZ1Q99689 392 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 DUSP9Q99956 384 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 DBNDD2Q9BQY9 259 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 SRRTQ9BXP5 876 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 CLIC5Q9NZA1 410 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 CALCOCO1Q9P1Z2 691 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 SUFUQ9UMX1 484 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 RRP15Q9Y3B9 282 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 MYH14Q7Z406 1995 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 SMG6Q86US8 1419 aaKnown RBP4.52□□□□□ -1.69
LINC01048-201ENST00000414480 MON2Q7Z3U7 1717 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 NRXN2Q9P2S2 1712 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 CARMIL3Q8ND23 1372 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 FER1L6Q2WGJ9 1857 aa4.52□□□□□ -1.69
LINC01048-201ENST00000414480 GTPBP10A4D1E9 387 aaKnown RBP4.51□□□□□ -1.69
LINC01048-201ENST00000414480 TRAF5O00463 557 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 CPLX1O14810 134 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 ADAMTS4O75173 837 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 MICAL2O94851 1124 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 HSPA4P34932 840 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 ADD2P35612 726 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 CCDC173Q0VFZ6 552 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 MRPL28Q13084 256 aaKnown RBP4.51□□□□□ -1.69
LINC01048-201ENST00000414480 ZBTB17Q13105 803 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 EIF2B5Q13144 721 aaKnown RBP4.51□□□□□ -1.69
LINC01048-201ENST00000414480 GRM1Q13255 1194 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 CFAP58Q5T655 872 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 AGAP9Q5VTM2 703 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 RNF43Q68DV7 783 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 WWC2Q6AWC2 1192 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 ISM2Q6H9L7 571 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 IQCEQ6IPM2 695 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 NFXL1Q6ZNB6 911 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 MCM10Q7L590 875 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 BRSK2Q8IWQ3 736 aa4.51□□□□□ -1.69
LINC01048-201ENST00000414480 TMEM87AQ8NBN3 555 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms