RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 DUOX1Q9NRD9 1551 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 CTAGE5O15320 804 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 PNMA6AP0CW24 399 aaPredicted RBP10.49□□□□□ -0.73
SNHG3-201ENST00000413987 COL9A3Q14050 684 aaPredicted RBP10.49□□□□□ -0.73
SNHG3-201ENST00000413987 CAVIN4Q5BKX8 364 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 PNMA8AQ86V59 439 aaPredicted RBP10.49□□□□□ -0.73
SNHG3-201ENST00000413987 CCDC83Q8IWF9 413 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 OSBP2Q969R2 916 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 AP1M1Q9BXS5 423 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 LSG1Q9H089 658 aaKnown RBP10.49□□□□□ -0.73
SNHG3-201ENST00000413987 PUS7LQ9H0K6 701 aaKnown RBP10.49□□□□□ -0.73
SNHG3-201ENST00000413987 ABCG4Q9H172 646 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 CNNM2Q9H8M5 875 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 PDRG1Q9NUG6 133 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 GGA1Q9UJY5 639 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 CEP131Q9UPN4 1083 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 ATP6V0A2Q9Y487 856 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 TAF6LQ9Y6J9 622 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 NDUFB5O43674 189 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 HIBADHP31937 336 aaKnown RBP10.49□□□□□ -0.73
SNHG3-201ENST00000413987 KCNJ6P48051 423 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 CLDN10P78369 228 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 GFOD2Q3B7J2 385 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 SLC9C2Q5TAH2 1124 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 OTUD6AQ7L8S5 288 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 CHAC2Q8WUX2 184 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 CDK5RAP3Q96JB5 506 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 MTFR1LQ9H019 292 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 IMPACTQ9P2X3 320 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNHG3-201ENST00000413987 MCM8Q9UJA3 840 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 SNX5Q9Y5X3 404 aa10.49□□□□□ -0.73
SNHG3-201ENST00000413987 LRRC37AA6NMS7 1700 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 MAST3O60307 1309 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 CCDC69A6NI79 296 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 CCP110O43303 1012 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 KATNA1O75449 491 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 CCDC175P0C221 793 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 KCNA3P22001 575 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 KIF5BP33176 963 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 CLCN6P51797 869 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 NFKB2Q00653 900 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 SNW1Q13573 536 aaKnown RBP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 GRIK5Q16478 980 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 DOK7Q18PE1 504 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 FAM102BQ5T8I3 360 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 NXNQ6DKJ4 435 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 MZT2BQ6NZ67 158 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 ADGRA1Q86SQ6 560 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 IQCF2Q8IXL9 164 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 RUFY2Q8WXA3 655 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 POLR3CQ9BUI4 534 aaPredicted RBP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 ZSWIM6Q9HCJ5 1215 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 CYP46A1Q9Y6A2 500 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 LTBP1Q14766 1721 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 USP27XA6NNY8 438 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 RNF113AO15541 343 aaKnown RBP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 UQCRFS1P1P0C7P4 283 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 CASTP20810 708 aaKnown RBP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 ALDH1B1P30837 517 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 PLA2G4AP47712 749 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 GUCY2FP51841 1108 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 BPIFB3P59826 476 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 FOXK1P85037 733 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 CCZ1BP86790 482 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 CCZ1P86791 482 aaPredicted RBP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 DPP8Q6V1X1 898 aaPredicted RBP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 RSRC2Q7L4I2 434 aaKnown RBP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 SP8Q8IXZ3 490 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 MAGEB6Q8N7X4 407 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 RASGRP4Q8TDF6 673 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 FAM167BQ9BTA0 163 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 RTFDC1Q9BY42 306 aaPredicted RBP10.48□□□□□ -0.73
SNHG3-201ENST00000413987 ST7Q9NRC1 585 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 SAGE1Q9NXZ1 904 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 TSKSQ9UJT2 592 aa10.48□□□□□ -0.73
SNHG3-201ENST00000413987 MED23Q9ULK4 1368 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 ZNF532Q9HCE3 1301 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 TPPPO94811 219 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 PRDX5P30044 214 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 GNA15P30679 374 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 STAT3P40763 770 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 PIN1Q13526 163 aaPredicted RBP10.47□□□□□ -0.73
SNHG3-201ENST00000413987 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 IQCB1Q15051 598 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 NFXL1Q6ZNB6 911 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 THNSL2Q86YJ6 484 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 GOLGA6L1Q8N7Z2 621 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 MIGA1Q8NAN2 632 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 PJA1Q8NG27 643 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 ZNF384Q8TF68 577 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 GTF3C6Q969F1 213 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 TIFAQ96CG3 184 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 SEC16BQ96JE7 1060 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 STRBPQ96SI9 672 aaKnown RBP10.47□□□□□ -0.73
SNHG3-201ENST00000413987 MXD3Q9BW11 206 aa10.47□□□□□ -0.73
SNHG3-201ENST00000413987 PLCB1Q9NQ66 1216 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms